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A new model for efficient, need‐driven progress in generating primary biodiversity information resources

PREMISE: The field of biodiversity informatics has developed rapidly in recent years, with broad availability of large‐scale information resources. However, online biodiversity information is biased spatially as a result of slow and uneven capture and digitization of existing data resources. The Wes...

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Autores principales: Asase, Alex, Sainge, Moses N., Radji, Raoufou A., Ugbogu, Omokafe A., Peterson, A. Townsend
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6976889/
https://www.ncbi.nlm.nih.gov/pubmed/31993260
http://dx.doi.org/10.1002/aps3.11318
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author Asase, Alex
Sainge, Moses N.
Radji, Raoufou A.
Ugbogu, Omokafe A.
Peterson, A. Townsend
author_facet Asase, Alex
Sainge, Moses N.
Radji, Raoufou A.
Ugbogu, Omokafe A.
Peterson, A. Townsend
author_sort Asase, Alex
collection PubMed
description PREMISE: The field of biodiversity informatics has developed rapidly in recent years, with broad availability of large‐scale information resources. However, online biodiversity information is biased spatially as a result of slow and uneven capture and digitization of existing data resources. The West African Plants Initiative approach to data capture is a prototype of a novel solution to the problems of the traditional model, in which the institutional “owner” of the specimens is responsible for digital capture of associated data. METHODS: We developed customized workflows for data capture in formats directly and permanently useful to the “owner” herbarium, and digitized significant numbers of new biodiversity records, adding to the information available for the plants of the region. RESULTS: In all, 190,953 records of species in 1965 genera and 331 families were captured by mid‐2018. These data records covered 16 West African countries, with most of the records (10,000–99,999) from Côte d'Ivoire, Ghana, Togo, Nigeria, and Cameroon, and the fewest data records from Mauritania (<100 records). The West African Plants Initiative has increased available digital accessible knowledge records for West African plants by about 54%. Several of the project institutions have put initial project data online as part of their Global Biodiversity Information Facility data contributions. The average cost of data capture ranged from US$0.50−1.00 per herbarium sheet. DISCUSSION: Data capture has been cost‐effective because it is much less expensive than de novo field collections, allows for development of information resources even for regions in which political situations make contemporary field sampling impossible, and provides a historical baseline against which to compare newer data as they become available. This new paradigm in specimen digitization has considerable promise to accelerate and improve the process of generating high‐quality biodiversity information, and can be replicated and applied in many biodiversity‐rich, information‐poor regions to remedy the present massive gaps in information availability.
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spelling pubmed-69768892020-01-28 A new model for efficient, need‐driven progress in generating primary biodiversity information resources Asase, Alex Sainge, Moses N. Radji, Raoufou A. Ugbogu, Omokafe A. Peterson, A. Townsend Appl Plant Sci Application Articles PREMISE: The field of biodiversity informatics has developed rapidly in recent years, with broad availability of large‐scale information resources. However, online biodiversity information is biased spatially as a result of slow and uneven capture and digitization of existing data resources. The West African Plants Initiative approach to data capture is a prototype of a novel solution to the problems of the traditional model, in which the institutional “owner” of the specimens is responsible for digital capture of associated data. METHODS: We developed customized workflows for data capture in formats directly and permanently useful to the “owner” herbarium, and digitized significant numbers of new biodiversity records, adding to the information available for the plants of the region. RESULTS: In all, 190,953 records of species in 1965 genera and 331 families were captured by mid‐2018. These data records covered 16 West African countries, with most of the records (10,000–99,999) from Côte d'Ivoire, Ghana, Togo, Nigeria, and Cameroon, and the fewest data records from Mauritania (<100 records). The West African Plants Initiative has increased available digital accessible knowledge records for West African plants by about 54%. Several of the project institutions have put initial project data online as part of their Global Biodiversity Information Facility data contributions. The average cost of data capture ranged from US$0.50−1.00 per herbarium sheet. DISCUSSION: Data capture has been cost‐effective because it is much less expensive than de novo field collections, allows for development of information resources even for regions in which political situations make contemporary field sampling impossible, and provides a historical baseline against which to compare newer data as they become available. This new paradigm in specimen digitization has considerable promise to accelerate and improve the process of generating high‐quality biodiversity information, and can be replicated and applied in many biodiversity‐rich, information‐poor regions to remedy the present massive gaps in information availability. John Wiley and Sons Inc. 2020-01-19 /pmc/articles/PMC6976889/ /pubmed/31993260 http://dx.doi.org/10.1002/aps3.11318 Text en © 2020 Asase et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Application Articles
Asase, Alex
Sainge, Moses N.
Radji, Raoufou A.
Ugbogu, Omokafe A.
Peterson, A. Townsend
A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title_full A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title_fullStr A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title_full_unstemmed A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title_short A new model for efficient, need‐driven progress in generating primary biodiversity information resources
title_sort new model for efficient, need‐driven progress in generating primary biodiversity information resources
topic Application Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6976889/
https://www.ncbi.nlm.nih.gov/pubmed/31993260
http://dx.doi.org/10.1002/aps3.11318
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