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Diatoms Are Selective Segregators in Global Ocean Planktonic Communities

Diatoms are a major component of phytoplankton, believed to be responsible for around 20% of the annual primary production on Earth. As abundant and ubiquitous organisms, they are known to establish biotic interactions with many other members of plankton. Through analyses of cooccurrence networks de...

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Autores principales: Vincent, Flora, Bowler, Chris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6977069/
https://www.ncbi.nlm.nih.gov/pubmed/31964765
http://dx.doi.org/10.1128/mSystems.00444-19
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author Vincent, Flora
Bowler, Chris
author_facet Vincent, Flora
Bowler, Chris
author_sort Vincent, Flora
collection PubMed
description Diatoms are a major component of phytoplankton, believed to be responsible for around 20% of the annual primary production on Earth. As abundant and ubiquitous organisms, they are known to establish biotic interactions with many other members of plankton. Through analyses of cooccurrence networks derived from the Tara Oceans expedition that take into account both biotic and abiotic factors in shaping the spatial distributions of species, we show that only 13% of diatom pairwise associations are driven by environmental conditions; the vast majority are independent of abiotic factors. In contrast to most other plankton groups, on a global scale, diatoms display a much higher proportion of negative correlations with other organisms, particularly toward potential predators and parasites, suggesting that their biogeography is constrained by top-down pressure. Genus-level analyses indicate that abundant diatoms are not necessarily the most connected and that species-specific abundance distribution patterns lead to negative associations with other organisms. In order to move forward in the biological interpretation of cooccurrence networks, an open-access extensive literature survey of diatom biotic interactions was compiled, of which 18.5% were recovered in the computed network. This result reveals the extent of what likely remains to be discovered in the field of planktonic biotic interactions, even for one of the best-known organismal groups. IMPORTANCE Diatoms are key phytoplankton in the modern ocean that are involved in numerous biotic interactions, ranging from symbiosis to predation and viral infection, which have considerable effects on global biogeochemical cycles. However, despite recent large-scale studies of plankton, we are still lacking a comprehensive picture of the diversity of diatom biotic interactions in the marine microbial community. Through the ecological interpretation of both inferred microbial association networks and available knowledge on diatom interactions compiled in an open-access database, we propose an ecosystems approach for exploring diatom interactions in the ocean.
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spelling pubmed-69770692020-02-03 Diatoms Are Selective Segregators in Global Ocean Planktonic Communities Vincent, Flora Bowler, Chris mSystems Research Article Diatoms are a major component of phytoplankton, believed to be responsible for around 20% of the annual primary production on Earth. As abundant and ubiquitous organisms, they are known to establish biotic interactions with many other members of plankton. Through analyses of cooccurrence networks derived from the Tara Oceans expedition that take into account both biotic and abiotic factors in shaping the spatial distributions of species, we show that only 13% of diatom pairwise associations are driven by environmental conditions; the vast majority are independent of abiotic factors. In contrast to most other plankton groups, on a global scale, diatoms display a much higher proportion of negative correlations with other organisms, particularly toward potential predators and parasites, suggesting that their biogeography is constrained by top-down pressure. Genus-level analyses indicate that abundant diatoms are not necessarily the most connected and that species-specific abundance distribution patterns lead to negative associations with other organisms. In order to move forward in the biological interpretation of cooccurrence networks, an open-access extensive literature survey of diatom biotic interactions was compiled, of which 18.5% were recovered in the computed network. This result reveals the extent of what likely remains to be discovered in the field of planktonic biotic interactions, even for one of the best-known organismal groups. IMPORTANCE Diatoms are key phytoplankton in the modern ocean that are involved in numerous biotic interactions, ranging from symbiosis to predation and viral infection, which have considerable effects on global biogeochemical cycles. However, despite recent large-scale studies of plankton, we are still lacking a comprehensive picture of the diversity of diatom biotic interactions in the marine microbial community. Through the ecological interpretation of both inferred microbial association networks and available knowledge on diatom interactions compiled in an open-access database, we propose an ecosystems approach for exploring diatom interactions in the ocean. American Society for Microbiology 2020-01-21 /pmc/articles/PMC6977069/ /pubmed/31964765 http://dx.doi.org/10.1128/mSystems.00444-19 Text en Copyright © 2020 Vincent and Bowler. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Vincent, Flora
Bowler, Chris
Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title_full Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title_fullStr Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title_full_unstemmed Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title_short Diatoms Are Selective Segregators in Global Ocean Planktonic Communities
title_sort diatoms are selective segregators in global ocean planktonic communities
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6977069/
https://www.ncbi.nlm.nih.gov/pubmed/31964765
http://dx.doi.org/10.1128/mSystems.00444-19
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