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Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks

Image-based automatic classification of vector mosquitoes has been investigated for decades for its practical applications such as early detection of potential mosquitoes-borne diseases. However, the classification accuracy of previous approaches has never been close to human experts’ and often imag...

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Autores principales: Park, Junyoung, Kim, Dong In, Choi, Byoungjo, Kang, Woochul, Kwon, Hyung Wook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978392/
https://www.ncbi.nlm.nih.gov/pubmed/31974419
http://dx.doi.org/10.1038/s41598-020-57875-1
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author Park, Junyoung
Kim, Dong In
Choi, Byoungjo
Kang, Woochul
Kwon, Hyung Wook
author_facet Park, Junyoung
Kim, Dong In
Choi, Byoungjo
Kang, Woochul
Kwon, Hyung Wook
author_sort Park, Junyoung
collection PubMed
description Image-based automatic classification of vector mosquitoes has been investigated for decades for its practical applications such as early detection of potential mosquitoes-borne diseases. However, the classification accuracy of previous approaches has never been close to human experts’ and often images of mosquitoes with certain postures and body parts, such as flatbed wings, are required to achieve good classification performance. Deep convolutional neural networks (DCNNs) are state-of-the-art approach to extracting visual features and classifying objects, and, hence, there exists great interest in applying DCNNs for the classification of vector mosquitoes from easy-to-acquire images. In this study, we investigated the capability of state-of-the-art deep learning models in classifying mosquito species having high inter-species similarity and intra-species variations. Since no off-the-shelf dataset was available capturing the variability of typical field-captured mosquitoes, we constructed a dataset with about 3,600 images of 8 mosquito species with various postures and deformation conditions. To further address data scarcity problems, we investigated the feasibility of transferring general features learned from generic dataset to the mosquito classification. Our result demonstrated that more than 97% classification accuracy can be achieved by fine-tuning general features if proper data augmentation techniques are applied together. Further, we analyzed how this high classification accuracy can be achieved by visualizing discriminative regions used by deep learning models. Our results showed that deep learning models exploit morphological features similar to those used by human experts.
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spelling pubmed-69783922020-01-30 Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks Park, Junyoung Kim, Dong In Choi, Byoungjo Kang, Woochul Kwon, Hyung Wook Sci Rep Article Image-based automatic classification of vector mosquitoes has been investigated for decades for its practical applications such as early detection of potential mosquitoes-borne diseases. However, the classification accuracy of previous approaches has never been close to human experts’ and often images of mosquitoes with certain postures and body parts, such as flatbed wings, are required to achieve good classification performance. Deep convolutional neural networks (DCNNs) are state-of-the-art approach to extracting visual features and classifying objects, and, hence, there exists great interest in applying DCNNs for the classification of vector mosquitoes from easy-to-acquire images. In this study, we investigated the capability of state-of-the-art deep learning models in classifying mosquito species having high inter-species similarity and intra-species variations. Since no off-the-shelf dataset was available capturing the variability of typical field-captured mosquitoes, we constructed a dataset with about 3,600 images of 8 mosquito species with various postures and deformation conditions. To further address data scarcity problems, we investigated the feasibility of transferring general features learned from generic dataset to the mosquito classification. Our result demonstrated that more than 97% classification accuracy can be achieved by fine-tuning general features if proper data augmentation techniques are applied together. Further, we analyzed how this high classification accuracy can be achieved by visualizing discriminative regions used by deep learning models. Our results showed that deep learning models exploit morphological features similar to those used by human experts. Nature Publishing Group UK 2020-01-23 /pmc/articles/PMC6978392/ /pubmed/31974419 http://dx.doi.org/10.1038/s41598-020-57875-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Park, Junyoung
Kim, Dong In
Choi, Byoungjo
Kang, Woochul
Kwon, Hyung Wook
Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title_full Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title_fullStr Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title_full_unstemmed Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title_short Classification and Morphological Analysis of Vector Mosquitoes using Deep Convolutional Neural Networks
title_sort classification and morphological analysis of vector mosquitoes using deep convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978392/
https://www.ncbi.nlm.nih.gov/pubmed/31974419
http://dx.doi.org/10.1038/s41598-020-57875-1
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