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Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective

A resting-state functional connectivity (rsFC)-constructed functional network (FN) derived from functional magnetic resonance imaging (fMRI) data can effectively mine alterations in brain function during aging due to the non-invasive and effective advantages of fMRI. With global health research focu...

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Autores principales: Wen, Xin, Dong, Li, Chen, Junjie, Xiang, Jie, Yang, Jie, Li, Hechun, Liu, Xiaobo, Luo, Cheng, Yao, Dezhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978665/
https://www.ncbi.nlm.nih.gov/pubmed/32009894
http://dx.doi.org/10.3389/fnins.2019.01435
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author Wen, Xin
Dong, Li
Chen, Junjie
Xiang, Jie
Yang, Jie
Li, Hechun
Liu, Xiaobo
Luo, Cheng
Yao, Dezhong
author_facet Wen, Xin
Dong, Li
Chen, Junjie
Xiang, Jie
Yang, Jie
Li, Hechun
Liu, Xiaobo
Luo, Cheng
Yao, Dezhong
author_sort Wen, Xin
collection PubMed
description A resting-state functional connectivity (rsFC)-constructed functional network (FN) derived from functional magnetic resonance imaging (fMRI) data can effectively mine alterations in brain function during aging due to the non-invasive and effective advantages of fMRI. With global health research focusing on aging, several open fMRI datasets have been made available that combine deep learning with big data and are a new, promising trend and open issue for brain information detection in fMRI studies of brain aging. In this study, we proposed a new method based on deep learning from the perspective of big data, named Deep neural network (DNN) with Autoencoder (AE) pretrained Functional connectivity Analysis (DAFA), to deeply mine the important functional connectivity changes in fMRI during brain aging. First, using resting-state fMRI data from 421 subjects from the CamCAN dataset, functional connectivities were calculated using sliding window method, and the complex functional patterns were mined by an AE. Then, to increase the statistical power and reliability of the results, we used an AE-pretrained DNN to relabel the functional connectivities of each subject to classify them as belonging to the attributes of young or old individuals. A method called search-back analysis was performed to find alterations in brain function during aging according to the relabeled functional connectivities. Finally, behavioral data regarding fluid intelligence and response time were used to verify the revealed functional changes. Compared to traditional methods, DAFA revealed additional, important aged-related changes in FC patterns [e.g., FC connections within the default mode (DMN) and the sensorimotor and cingulo-opercular networks, as well as connections between the frontoparietal and cingulo-opercular networks, between the DMN and the frontoparietal/cingulo-opercular/sensorimotor/occipital/cerebellum networks, and between the sensorimotor and frontoparietal/cingulo-opercular networks], which were correlated to behavioral data. These findings demonstrated that the proposed DAFA method was superior to traditional FC-determining methods in discovering changes in brain functional connectivity during aging. In addition, it may be a promising method for exploring important information in other fMRI studies.
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spelling pubmed-69786652020-02-01 Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective Wen, Xin Dong, Li Chen, Junjie Xiang, Jie Yang, Jie Li, Hechun Liu, Xiaobo Luo, Cheng Yao, Dezhong Front Neurosci Neuroscience A resting-state functional connectivity (rsFC)-constructed functional network (FN) derived from functional magnetic resonance imaging (fMRI) data can effectively mine alterations in brain function during aging due to the non-invasive and effective advantages of fMRI. With global health research focusing on aging, several open fMRI datasets have been made available that combine deep learning with big data and are a new, promising trend and open issue for brain information detection in fMRI studies of brain aging. In this study, we proposed a new method based on deep learning from the perspective of big data, named Deep neural network (DNN) with Autoencoder (AE) pretrained Functional connectivity Analysis (DAFA), to deeply mine the important functional connectivity changes in fMRI during brain aging. First, using resting-state fMRI data from 421 subjects from the CamCAN dataset, functional connectivities were calculated using sliding window method, and the complex functional patterns were mined by an AE. Then, to increase the statistical power and reliability of the results, we used an AE-pretrained DNN to relabel the functional connectivities of each subject to classify them as belonging to the attributes of young or old individuals. A method called search-back analysis was performed to find alterations in brain function during aging according to the relabeled functional connectivities. Finally, behavioral data regarding fluid intelligence and response time were used to verify the revealed functional changes. Compared to traditional methods, DAFA revealed additional, important aged-related changes in FC patterns [e.g., FC connections within the default mode (DMN) and the sensorimotor and cingulo-opercular networks, as well as connections between the frontoparietal and cingulo-opercular networks, between the DMN and the frontoparietal/cingulo-opercular/sensorimotor/occipital/cerebellum networks, and between the sensorimotor and frontoparietal/cingulo-opercular networks], which were correlated to behavioral data. These findings demonstrated that the proposed DAFA method was superior to traditional FC-determining methods in discovering changes in brain functional connectivity during aging. In addition, it may be a promising method for exploring important information in other fMRI studies. Frontiers Media S.A. 2020-01-17 /pmc/articles/PMC6978665/ /pubmed/32009894 http://dx.doi.org/10.3389/fnins.2019.01435 Text en Copyright © 2020 Wen, Dong, Chen, Xiang, Yang, Li, Liu, Luo and Yao. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Wen, Xin
Dong, Li
Chen, Junjie
Xiang, Jie
Yang, Jie
Li, Hechun
Liu, Xiaobo
Luo, Cheng
Yao, Dezhong
Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title_full Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title_fullStr Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title_full_unstemmed Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title_short Detecting the Information of Functional Connectivity Networks in Normal Aging Using Deep Learning From a Big Data Perspective
title_sort detecting the information of functional connectivity networks in normal aging using deep learning from a big data perspective
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978665/
https://www.ncbi.nlm.nih.gov/pubmed/32009894
http://dx.doi.org/10.3389/fnins.2019.01435
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