Cargando…
Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides)
BACKGROUND: Spermatogenesis is an intricate process regulated by a finely organized network. The orange-spotted grouper (Epinephelus coioides) is a protogynous hermaphroditic fish, but the regulatory mechanism of its spermatogenesis is not well-understood. In the present study, transcriptome sequenc...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6979330/ https://www.ncbi.nlm.nih.gov/pubmed/31973692 http://dx.doi.org/10.1186/s12864-020-6477-4 |
_version_ | 1783490877137616896 |
---|---|
author | Wu, Xi Yang, Yang Zhong, Chaoyue Guo, Yin Li, Shuisheng Lin, Haoran Liu, Xiaochun |
author_facet | Wu, Xi Yang, Yang Zhong, Chaoyue Guo, Yin Li, Shuisheng Lin, Haoran Liu, Xiaochun |
author_sort | Wu, Xi |
collection | PubMed |
description | BACKGROUND: Spermatogenesis is an intricate process regulated by a finely organized network. The orange-spotted grouper (Epinephelus coioides) is a protogynous hermaphroditic fish, but the regulatory mechanism of its spermatogenesis is not well-understood. In the present study, transcriptome sequencing of the male germ cells isolated from orange-spotted grouper was performed to explore the molecular mechanism underlying spermatogenesis. RESULTS: In this study, the orange-spotted grouper was induced to change sex from female to male by 17alpha-methyltestosterone (MT) implantation. During the spermatogenesis, male germ cells (spermatogonia, spermatocytes, spermatids, and spermatozoa) were isolated by laser capture microdissection. Transcriptomic analysis for the isolated cells was performed. A total of 244,984,338 clean reads were generated from four cDNA libraries. Real-time PCR results of 13 genes related to sex differentiation and hormone metabolism indicated that transcriptome data are reliable. RNA-seq data showed that the female-related genes and genes involved in hormone metabolism were highly expressed in spermatogonia and spermatozoa, suggesting that these genes participate in the spermatogenesis. Interestingly, the expression of zbtb family genes showed significantly changes in the RNA-seq data, and their expression patterns were further examined during spermatogenesis. The analysis of cellular localization of Eczbtb40 and the co-localization of Eczbtb40 and Eccyp17a1 in different gonadal stages suggested that Eczbtb40 might interact with Eccyp17a1 during spermatogenesis. CONCLUSIONS: Our study, for the first time, investigated the transcriptome of the male germ cells from orange-spotted grouper, and identified functional genes, GO terms, and KEGG pathways involved in spermatogenesis. Furthermore, Eczbtb40 was first characterized and its role during spermatogenesis was predicted. These data will contribute to future studies on the molecular mechanism of spermatogenesis in teleosts. |
format | Online Article Text |
id | pubmed-6979330 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-69793302020-01-29 Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) Wu, Xi Yang, Yang Zhong, Chaoyue Guo, Yin Li, Shuisheng Lin, Haoran Liu, Xiaochun BMC Genomics Research Article BACKGROUND: Spermatogenesis is an intricate process regulated by a finely organized network. The orange-spotted grouper (Epinephelus coioides) is a protogynous hermaphroditic fish, but the regulatory mechanism of its spermatogenesis is not well-understood. In the present study, transcriptome sequencing of the male germ cells isolated from orange-spotted grouper was performed to explore the molecular mechanism underlying spermatogenesis. RESULTS: In this study, the orange-spotted grouper was induced to change sex from female to male by 17alpha-methyltestosterone (MT) implantation. During the spermatogenesis, male germ cells (spermatogonia, spermatocytes, spermatids, and spermatozoa) were isolated by laser capture microdissection. Transcriptomic analysis for the isolated cells was performed. A total of 244,984,338 clean reads were generated from four cDNA libraries. Real-time PCR results of 13 genes related to sex differentiation and hormone metabolism indicated that transcriptome data are reliable. RNA-seq data showed that the female-related genes and genes involved in hormone metabolism were highly expressed in spermatogonia and spermatozoa, suggesting that these genes participate in the spermatogenesis. Interestingly, the expression of zbtb family genes showed significantly changes in the RNA-seq data, and their expression patterns were further examined during spermatogenesis. The analysis of cellular localization of Eczbtb40 and the co-localization of Eczbtb40 and Eccyp17a1 in different gonadal stages suggested that Eczbtb40 might interact with Eccyp17a1 during spermatogenesis. CONCLUSIONS: Our study, for the first time, investigated the transcriptome of the male germ cells from orange-spotted grouper, and identified functional genes, GO terms, and KEGG pathways involved in spermatogenesis. Furthermore, Eczbtb40 was first characterized and its role during spermatogenesis was predicted. These data will contribute to future studies on the molecular mechanism of spermatogenesis in teleosts. BioMed Central 2020-01-23 /pmc/articles/PMC6979330/ /pubmed/31973692 http://dx.doi.org/10.1186/s12864-020-6477-4 Text en © The Author(s). 2020 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Wu, Xi Yang, Yang Zhong, Chaoyue Guo, Yin Li, Shuisheng Lin, Haoran Liu, Xiaochun Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title | Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title_full | Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title_fullStr | Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title_full_unstemmed | Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title_short | Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides) |
title_sort | transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (epinephelus coioides) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6979330/ https://www.ncbi.nlm.nih.gov/pubmed/31973692 http://dx.doi.org/10.1186/s12864-020-6477-4 |
work_keys_str_mv | AT wuxi transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT yangyang transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT zhongchaoyue transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT guoyin transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT lishuisheng transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT linhaoran transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides AT liuxiaochun transcriptomeprofilingoflasercapturedgermcellsandfunctionalcharacterizationofzbtb40during17alphamethyltestosteroneinducedspermatogenesisinorangespottedgrouperepinepheluscoioides |