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Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations

The integration of nucleic acids with nanomaterials has attracted great attention from various research communities in search of new nanoscale tools for a range of applications, from electronics to biomedical uses. MXenes are a new class of multielement 2D materials baring exciting properties mostly...

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Autores principales: Manzanares-Palenzuela, C. Lorena, Pourrahimi, Amir M., Gonzalez-Julian, J., Sofer, Zdenek, Pykal, Martin, Otyepka, Michal, Pumera, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6979399/
https://www.ncbi.nlm.nih.gov/pubmed/32055358
http://dx.doi.org/10.1039/c9sc03049b
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author Manzanares-Palenzuela, C. Lorena
Pourrahimi, Amir M.
Gonzalez-Julian, J.
Sofer, Zdenek
Pykal, Martin
Otyepka, Michal
Pumera, Martin
author_facet Manzanares-Palenzuela, C. Lorena
Pourrahimi, Amir M.
Gonzalez-Julian, J.
Sofer, Zdenek
Pykal, Martin
Otyepka, Michal
Pumera, Martin
author_sort Manzanares-Palenzuela, C. Lorena
collection PubMed
description The integration of nucleic acids with nanomaterials has attracted great attention from various research communities in search of new nanoscale tools for a range of applications, from electronics to biomedical uses. MXenes are a new class of multielement 2D materials baring exciting properties mostly directed to energy-related fields. These advanced materials are now beginning to enter the biomedical field given their biocompatibility, hydrophilicity and near-infrared absorption. Herein, we elucidate the interaction of MXene Ti(3)C(2)T(x) with fluorophore-tagged DNA by fluorescence measurements and molecular dynamics simulations. The system showed potential for biosensing with unequivocal detection at picomole levels and single-base discrimination. We found that this material possesses a kinetically unique entrapment/release behavior, with potential implications in time-controlled biomolecule delivery. Our findings present MXenes as platforms for binding nucleic acids, contributing to their potential for hybridization-based biosensing and related bio-applications.
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spelling pubmed-69793992020-02-13 Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations Manzanares-Palenzuela, C. Lorena Pourrahimi, Amir M. Gonzalez-Julian, J. Sofer, Zdenek Pykal, Martin Otyepka, Michal Pumera, Martin Chem Sci Chemistry The integration of nucleic acids with nanomaterials has attracted great attention from various research communities in search of new nanoscale tools for a range of applications, from electronics to biomedical uses. MXenes are a new class of multielement 2D materials baring exciting properties mostly directed to energy-related fields. These advanced materials are now beginning to enter the biomedical field given their biocompatibility, hydrophilicity and near-infrared absorption. Herein, we elucidate the interaction of MXene Ti(3)C(2)T(x) with fluorophore-tagged DNA by fluorescence measurements and molecular dynamics simulations. The system showed potential for biosensing with unequivocal detection at picomole levels and single-base discrimination. We found that this material possesses a kinetically unique entrapment/release behavior, with potential implications in time-controlled biomolecule delivery. Our findings present MXenes as platforms for binding nucleic acids, contributing to their potential for hybridization-based biosensing and related bio-applications. Royal Society of Chemistry 2019-09-23 /pmc/articles/PMC6979399/ /pubmed/32055358 http://dx.doi.org/10.1039/c9sc03049b Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0)
spellingShingle Chemistry
Manzanares-Palenzuela, C. Lorena
Pourrahimi, Amir M.
Gonzalez-Julian, J.
Sofer, Zdenek
Pykal, Martin
Otyepka, Michal
Pumera, Martin
Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title_full Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title_fullStr Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title_full_unstemmed Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title_short Interaction of single- and double-stranded DNA with multilayer MXene by fluorescence spectroscopy and molecular dynamics simulations
title_sort interaction of single- and double-stranded dna with multilayer mxene by fluorescence spectroscopy and molecular dynamics simulations
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6979399/
https://www.ncbi.nlm.nih.gov/pubmed/32055358
http://dx.doi.org/10.1039/c9sc03049b
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