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Deep learning interpretation of echocardiograms

Echocardiography uses ultrasound technology to capture high temporal and spatial resolution images of the heart and surrounding structures, and is the most common imaging modality in cardiovascular medicine. Using convolutional neural networks on a large new dataset, we show that deep learning appli...

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Autores principales: Ghorbani, Amirata, Ouyang, David, Abid, Abubakar, He, Bryan, Chen, Jonathan H., Harrington, Robert A., Liang, David H., Ashley, Euan A., Zou, James Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6981156/
https://www.ncbi.nlm.nih.gov/pubmed/31993508
http://dx.doi.org/10.1038/s41746-019-0216-8
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author Ghorbani, Amirata
Ouyang, David
Abid, Abubakar
He, Bryan
Chen, Jonathan H.
Harrington, Robert A.
Liang, David H.
Ashley, Euan A.
Zou, James Y.
author_facet Ghorbani, Amirata
Ouyang, David
Abid, Abubakar
He, Bryan
Chen, Jonathan H.
Harrington, Robert A.
Liang, David H.
Ashley, Euan A.
Zou, James Y.
author_sort Ghorbani, Amirata
collection PubMed
description Echocardiography uses ultrasound technology to capture high temporal and spatial resolution images of the heart and surrounding structures, and is the most common imaging modality in cardiovascular medicine. Using convolutional neural networks on a large new dataset, we show that deep learning applied to echocardiography can identify local cardiac structures, estimate cardiac function, and predict systemic phenotypes that modify cardiovascular risk but not readily identifiable to human interpretation. Our deep learning model, EchoNet, accurately identified the presence of pacemaker leads (AUC = 0.89), enlarged left atrium (AUC = 0.86), left ventricular hypertrophy (AUC = 0.75), left ventricular end systolic and diastolic volumes ([Formula: see text]  = 0.74 and [Formula: see text]  = 0.70), and ejection fraction ([Formula: see text]  = 0.50), as well as predicted systemic phenotypes of age ([Formula: see text]  = 0.46), sex (AUC = 0.88), weight ([Formula: see text]  = 0.56), and height ([Formula: see text]  = 0.33). Interpretation analysis validates that EchoNet shows appropriate attention to key cardiac structures when performing human-explainable tasks and highlights hypothesis-generating regions of interest when predicting systemic phenotypes difficult for human interpretation. Machine learning on echocardiography images can streamline repetitive tasks in the clinical workflow, provide preliminary interpretation in areas with insufficient qualified cardiologists, and predict phenotypes challenging for human evaluation.
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spelling pubmed-69811562020-01-28 Deep learning interpretation of echocardiograms Ghorbani, Amirata Ouyang, David Abid, Abubakar He, Bryan Chen, Jonathan H. Harrington, Robert A. Liang, David H. Ashley, Euan A. Zou, James Y. NPJ Digit Med Article Echocardiography uses ultrasound technology to capture high temporal and spatial resolution images of the heart and surrounding structures, and is the most common imaging modality in cardiovascular medicine. Using convolutional neural networks on a large new dataset, we show that deep learning applied to echocardiography can identify local cardiac structures, estimate cardiac function, and predict systemic phenotypes that modify cardiovascular risk but not readily identifiable to human interpretation. Our deep learning model, EchoNet, accurately identified the presence of pacemaker leads (AUC = 0.89), enlarged left atrium (AUC = 0.86), left ventricular hypertrophy (AUC = 0.75), left ventricular end systolic and diastolic volumes ([Formula: see text]  = 0.74 and [Formula: see text]  = 0.70), and ejection fraction ([Formula: see text]  = 0.50), as well as predicted systemic phenotypes of age ([Formula: see text]  = 0.46), sex (AUC = 0.88), weight ([Formula: see text]  = 0.56), and height ([Formula: see text]  = 0.33). Interpretation analysis validates that EchoNet shows appropriate attention to key cardiac structures when performing human-explainable tasks and highlights hypothesis-generating regions of interest when predicting systemic phenotypes difficult for human interpretation. Machine learning on echocardiography images can streamline repetitive tasks in the clinical workflow, provide preliminary interpretation in areas with insufficient qualified cardiologists, and predict phenotypes challenging for human evaluation. Nature Publishing Group UK 2020-01-24 /pmc/articles/PMC6981156/ /pubmed/31993508 http://dx.doi.org/10.1038/s41746-019-0216-8 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ghorbani, Amirata
Ouyang, David
Abid, Abubakar
He, Bryan
Chen, Jonathan H.
Harrington, Robert A.
Liang, David H.
Ashley, Euan A.
Zou, James Y.
Deep learning interpretation of echocardiograms
title Deep learning interpretation of echocardiograms
title_full Deep learning interpretation of echocardiograms
title_fullStr Deep learning interpretation of echocardiograms
title_full_unstemmed Deep learning interpretation of echocardiograms
title_short Deep learning interpretation of echocardiograms
title_sort deep learning interpretation of echocardiograms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6981156/
https://www.ncbi.nlm.nih.gov/pubmed/31993508
http://dx.doi.org/10.1038/s41746-019-0216-8
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