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Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa
The p53 family of transcription factors plays key roles in development, genome stability, senescence and tumor development, and p53 is the most important tumor suppressor protein in humans. Although intensively investigated for many years, its initial evolutionary history is not yet fully elucidated...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6981761/ https://www.ncbi.nlm.nih.gov/pubmed/31861340 http://dx.doi.org/10.3390/ijms21010006 |
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author | Bartas, Martin Brázda, Václav Červeň, Jiří Pečinka, Petr |
author_facet | Bartas, Martin Brázda, Václav Červeň, Jiří Pečinka, Petr |
author_sort | Bartas, Martin |
collection | PubMed |
description | The p53 family of transcription factors plays key roles in development, genome stability, senescence and tumor development, and p53 is the most important tumor suppressor protein in humans. Although intensively investigated for many years, its initial evolutionary history is not yet fully elucidated. Using bioinformatic and structure prediction methods on current databases containing newly-sequenced genomes and transcriptomes, we present a detailed characterization of p53 family homologs in remote members of the Holozoa group, in the unicellular clades Filasterea, Ichthyosporea and Corallochytrea. Moreover, we show that these newly characterized homologous sequences contain domains that can form structures with high similarity to the human p53 family DNA-binding domain, and some also show similarities to the oligomerization and SAM domains. The presence of these remote homologs demonstrates an ancient origin of the p53 protein family. |
format | Online Article Text |
id | pubmed-6981761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-69817612020-02-07 Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa Bartas, Martin Brázda, Václav Červeň, Jiří Pečinka, Petr Int J Mol Sci Article The p53 family of transcription factors plays key roles in development, genome stability, senescence and tumor development, and p53 is the most important tumor suppressor protein in humans. Although intensively investigated for many years, its initial evolutionary history is not yet fully elucidated. Using bioinformatic and structure prediction methods on current databases containing newly-sequenced genomes and transcriptomes, we present a detailed characterization of p53 family homologs in remote members of the Holozoa group, in the unicellular clades Filasterea, Ichthyosporea and Corallochytrea. Moreover, we show that these newly characterized homologous sequences contain domains that can form structures with high similarity to the human p53 family DNA-binding domain, and some also show similarities to the oligomerization and SAM domains. The presence of these remote homologs demonstrates an ancient origin of the p53 protein family. MDPI 2019-12-18 /pmc/articles/PMC6981761/ /pubmed/31861340 http://dx.doi.org/10.3390/ijms21010006 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bartas, Martin Brázda, Václav Červeň, Jiří Pečinka, Petr Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title | Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title_full | Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title_fullStr | Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title_full_unstemmed | Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title_short | Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa |
title_sort | characterization of p53 family homologs in evolutionary remote branches of holozoa |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6981761/ https://www.ncbi.nlm.nih.gov/pubmed/31861340 http://dx.doi.org/10.3390/ijms21010006 |
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