Cargando…

A basic motif anchoring ISWI to nucleosome acidic patch regulates nucleosome spacing

Recent studies have implicated the nucleosome acidic patch in the activity of ATP-dependent chromatin remodeling machines. We employed a photocrosslinking-based nucleosome profiling technology - ‘photoscanning’- to identify a conserved basic motif within the catalytic subunit of ISWI remodelers, SNF...

Descripción completa

Detalles Bibliográficos
Autores principales:	Dao, Hai T., Dul, Barbara E., Dann, Geoffrey P., Liszczak, Glen P., Muir, Tom W.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2019
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6982587/ https://www.ncbi.nlm.nih.gov/pubmed/31819269 http://dx.doi.org/10.1038/s41589-019-0413-4

Ejemplares similares

The nucleosomal acidic patch relieves auto-inhibition by the ISWI remodeler SNF2h
por: Gamarra, Nathan, et al.
Publicado: (2018)

ISWI Remodels Nucleosomes through a Random Walk
por: Al-Ani, Gada, et al.
Publicado: (2014)

Asymmetry between the two acidic patches dictates the direction of nucleosome sliding by the ISWI chromatin remodeler
por: Levendosky, Robert F, et al.
Publicado: (2019)

The Nucleosome-Remodeling ATPase ISWI Is Regulated by Poly-ADP-Ribosylation
por: Sala, Anna, et al.
Publicado: (2008)

Regulation of ISWI involves inhibitory modules antagonized by nucleosomal epitopes
por: Clapier, Cedric R., et al.
Publicado: (2012)

Kinetic control of nucleosome displacement by ISWI/ACF chromatin remodelers
por: Florescu, Ana-Maria, et al.
Publicado: (2013)

The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells
por: Klein, David C., et al.
Publicado: (2023)

Correction: The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells
por: Klein, David C., et al.
Publicado: (2023)

Genetic Identification of a Network of Factors that Functionally Interact with the Nucleosome Remodeling ATPase ISWI
por: Burgio, Giosalba, et al.
Publicado: (2008)

Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome
por: Chittori, Sagar, et al.
Publicado: (2019)

Quantitative Determination of Binding of ISWI to Nucleosomes and DNA Shows Allosteric Regulation of DNA Binding by Nucleotides
por: Al-Ani, Gada, et al.
Publicado: (2014)

Accelerated Chromatin Biochemistry Using DNA-Barcoded Nucleosome Libraries
por: Nguyen, Uyen T. T., et al.
Publicado: (2014)

Serine ADP-ribosylation marks nucleosomes for ALC1-dependent chromatin remodeling
por: Mohapatra, Jugal, et al.
Publicado: (2021)

Mapping the electrostatic potential of the nucleosome acidic patch
por: Zhang, Heyi, et al.
Publicado: (2021)

A systematic analysis of nucleosome core particle and nucleosome-nucleosome stacking structure
por: Korolev, Nikolay, et al.
Publicado: (2018)

Oligonucleotide Sequence Motifs as Nucleosome Positioning Signals
por: Collings, Clayton K., et al.
Publicado: (2010)

The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma
por: McBride, Matthew J., et al.
Publicado: (2020)

Nucleosomes determine their own patch size in base excision repair
por: Meas, Rithy, et al.
Publicado: (2016)

Circulating Nucleosomes and Nucleosome Modifications as Biomarkers in Cancer
por: McAnena, Peter, et al.
Publicado: (2017)

Nucleosome spacing and chromatin higher-order folding
por: Grigoryev, Sergei A.
Publicado: (2012)

DNA topology in chromatin is defined by nucleosome spacing
por: Nikitina, Tatiana, et al.
Publicado: (2017)

Author Correction: The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma
por: McBride, Matthew J., et al.
Publicado: (2020)

Nucleosome Positioning with Set of Key Positions and Nucleosome Affinity
por: Wang, Jia, et al.
Publicado: (2014)

Inter-nucleosomal potentials from nucleosomal positioning data
por: Li, Kunhe, et al.
Publicado: (2022)

Mechanistic Insights into Regulation of the ALC1 Remodeler by the Nucleosome Acidic Patch
por: Lehmann, Laura C., et al.
Publicado: (2020)

An Advanced Coarse-Grained Nucleosome Core Particle Model for Computer Simulations of Nucleosome-Nucleosome Interactions under Varying Ionic Conditions
por: Fan, Yanping, et al.
Publicado: (2013)

Replicating nucleosomes
por: Ramachandran, Srinivas, et al.
Publicado: (2015)

Nucleosome Positioning
por: Nishida, Hiromi
Publicado: (2012)

Pyrosequencing positions nucleosomes precisely
por: Owen-Hughes, Tom, et al.
Publicado: (2007)

Choreography for nucleosomes: the conformational freedom of the nucleosomal filament and its limitations
por: Engelhardt, Mogens
Publicado: (2007)

Human nucleosomes: special role of CG dinucleotides and Alu-nucleosomes
por: Bettecken, Thomas, et al.
Publicado: (2011)

Inter-nucleosomal communication between histone modifications for nucleosome phasing
por: Chen, Weizhong, et al.
Publicado: (2018)

Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs
por: Nalabothula, Narasimharao, et al.
Publicado: (2013)

Targeting the Nucleosome Acidic Patch by Viral Proteins: Two Birds with One Stone?
por: Lagadec, Floriane, et al.
Publicado: (2022)

Trajectories of microsecond molecular dynamics simulations of nucleosomes and nucleosome core particles
por: Shaytan, Alexey K., et al.
Publicado: (2016)

Characterization of Dnmt1 Binding and DNA Methylation on Nucleosomes and Nucleosomal Arrays
por: Schrader, Anna, et al.
Publicado: (2015)

Nucleosomal signatures impose nucleosome positioning in coding and noncoding sequences in the genome
por: González, Sara, et al.
Publicado: (2016)

NDF, a nucleosome-destabilizing factor that facilitates transcription through nucleosomes
por: Fei, Jia, et al.
Publicado: (2018)

On the role of inter-nucleosomal interactions and intrinsic nucleosome dynamics in chromatin function
por: Krajewski, Wladyslaw A.
Publicado: (2016)

Comprehensive nucleosome interactome screen establishes fundamental principles of nucleosome binding
por: Skrajna, Aleksandra, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_a79flvdqrj2eva9rde1c5lom7q