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Global targeting of functional tyrosines using sulfur triazole exchange chemistry

Covalent probes serve as valuable tools for global investigation of protein function and ligand binding capacity. Despite efforts to expand coverage of residues available for chemical proteomics (e.g. cysteine and lysine), a large fraction of the proteome remains inaccessible with current activity-b...

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Autores principales: Hahm, Heung Sik, Toroitich, Emmanuel K., Borne, Adam L., Brulet, Jeffrey W., Libby, Adam H., Yuan, Kun, Ware, Timothy B., McCloud, Rebecca L., Ciancone, Anthony M., Hsu, Ku-Lung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6982592/
https://www.ncbi.nlm.nih.gov/pubmed/31768034
http://dx.doi.org/10.1038/s41589-019-0404-5
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author Hahm, Heung Sik
Toroitich, Emmanuel K.
Borne, Adam L.
Brulet, Jeffrey W.
Libby, Adam H.
Yuan, Kun
Ware, Timothy B.
McCloud, Rebecca L.
Ciancone, Anthony M.
Hsu, Ku-Lung
author_facet Hahm, Heung Sik
Toroitich, Emmanuel K.
Borne, Adam L.
Brulet, Jeffrey W.
Libby, Adam H.
Yuan, Kun
Ware, Timothy B.
McCloud, Rebecca L.
Ciancone, Anthony M.
Hsu, Ku-Lung
author_sort Hahm, Heung Sik
collection PubMed
description Covalent probes serve as valuable tools for global investigation of protein function and ligand binding capacity. Despite efforts to expand coverage of residues available for chemical proteomics (e.g. cysteine and lysine), a large fraction of the proteome remains inaccessible with current activity-based probes. Here, we introduce sulfur-triazole exchange (SuTEx) chemistry as a tunable platform for developing covalent probes with broad applications for chemical proteomics. We show modifications to the triazole leaving group can furnish sulfonyl probes with ~5-fold enhanced chemoselectivity for tyrosines over other nucleophilic amino acids to investigate, for the first time, more than 10,000 tyrosine sites in lysates and live cells. We discover that tyrosines with enhanced nucleophilicity are enriched in enzymatic, protein-protein interaction, and nucleotide recognition domains. We apply SuTEx as a chemical phosphoproteomics strategy to monitor activation of phosphotyrosine sites. Collectively, we describe SuTEx as a biocompatible chemistry for chemical biology investigations of the human proteome.
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spelling pubmed-69825922020-05-25 Global targeting of functional tyrosines using sulfur triazole exchange chemistry Hahm, Heung Sik Toroitich, Emmanuel K. Borne, Adam L. Brulet, Jeffrey W. Libby, Adam H. Yuan, Kun Ware, Timothy B. McCloud, Rebecca L. Ciancone, Anthony M. Hsu, Ku-Lung Nat Chem Biol Article Covalent probes serve as valuable tools for global investigation of protein function and ligand binding capacity. Despite efforts to expand coverage of residues available for chemical proteomics (e.g. cysteine and lysine), a large fraction of the proteome remains inaccessible with current activity-based probes. Here, we introduce sulfur-triazole exchange (SuTEx) chemistry as a tunable platform for developing covalent probes with broad applications for chemical proteomics. We show modifications to the triazole leaving group can furnish sulfonyl probes with ~5-fold enhanced chemoselectivity for tyrosines over other nucleophilic amino acids to investigate, for the first time, more than 10,000 tyrosine sites in lysates and live cells. We discover that tyrosines with enhanced nucleophilicity are enriched in enzymatic, protein-protein interaction, and nucleotide recognition domains. We apply SuTEx as a chemical phosphoproteomics strategy to monitor activation of phosphotyrosine sites. Collectively, we describe SuTEx as a biocompatible chemistry for chemical biology investigations of the human proteome. 2019-11-25 2020-02 /pmc/articles/PMC6982592/ /pubmed/31768034 http://dx.doi.org/10.1038/s41589-019-0404-5 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Hahm, Heung Sik
Toroitich, Emmanuel K.
Borne, Adam L.
Brulet, Jeffrey W.
Libby, Adam H.
Yuan, Kun
Ware, Timothy B.
McCloud, Rebecca L.
Ciancone, Anthony M.
Hsu, Ku-Lung
Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title_full Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title_fullStr Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title_full_unstemmed Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title_short Global targeting of functional tyrosines using sulfur triazole exchange chemistry
title_sort global targeting of functional tyrosines using sulfur triazole exchange chemistry
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6982592/
https://www.ncbi.nlm.nih.gov/pubmed/31768034
http://dx.doi.org/10.1038/s41589-019-0404-5
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