Cargando…
Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses
Moringa oleifera Lam. (MO) is called the “Miracle Tree” because of its extensive pharmacological activity. In addition to being an important food, it has also been used for a long time in traditional medicine in Asia for the treatment of chronic diseases such as diabetes and obesity. In this study,...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983023/ https://www.ncbi.nlm.nih.gov/pubmed/31906524 http://dx.doi.org/10.3390/molecules25010189 |
_version_ | 1783491424242630656 |
---|---|
author | Yang, Yang Shi, Chong-Yin Xie, Jing Dai, Jia-He He, Shui-Lian Tian, Yang |
author_facet | Yang, Yang Shi, Chong-Yin Xie, Jing Dai, Jia-He He, Shui-Lian Tian, Yang |
author_sort | Yang, Yang |
collection | PubMed |
description | Moringa oleifera Lam. (MO) is called the “Miracle Tree” because of its extensive pharmacological activity. In addition to being an important food, it has also been used for a long time in traditional medicine in Asia for the treatment of chronic diseases such as diabetes and obesity. In this study, by constructing a library of MO phytochemical structures and using Discovery Studio software, compounds were subjected to virtual screening and molecular docking experiments related to their inhibition of dipeptidyl peptidase (DPP-IV), an important target for the treatment of type 2 diabetes. After the four-step screening process, involving screening for drug-like compounds, predicting the absorption, distribution, metabolism, excretion, and toxicity (ADME/T) of pharmacokinetic properties, LibDock heatmap matching analysis, and CDOCKER molecular docking analysis, three MO components that were candidate DPP-IV inhibitors were identified and their docking modes were analyzed. In vitro activity verification showed that all three MO components had certain DPP-IV inhibitory activities, of which O-Ethyl-4-[(α-l-rhamnosyloxy)-benzyl] carbamate (compound 1) had the highest activity (half-maximal inhibitory concentration [IC(50)] = 798 nM). This study provides a reference for exploring the molecular mechanisms underlying the anti-diabetic activity of MO. The obtained DPP-IV inhibitors could be used for structural optimization and in-depth in vivo evaluation. |
format | Online Article Text |
id | pubmed-6983023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-69830232020-02-06 Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses Yang, Yang Shi, Chong-Yin Xie, Jing Dai, Jia-He He, Shui-Lian Tian, Yang Molecules Article Moringa oleifera Lam. (MO) is called the “Miracle Tree” because of its extensive pharmacological activity. In addition to being an important food, it has also been used for a long time in traditional medicine in Asia for the treatment of chronic diseases such as diabetes and obesity. In this study, by constructing a library of MO phytochemical structures and using Discovery Studio software, compounds were subjected to virtual screening and molecular docking experiments related to their inhibition of dipeptidyl peptidase (DPP-IV), an important target for the treatment of type 2 diabetes. After the four-step screening process, involving screening for drug-like compounds, predicting the absorption, distribution, metabolism, excretion, and toxicity (ADME/T) of pharmacokinetic properties, LibDock heatmap matching analysis, and CDOCKER molecular docking analysis, three MO components that were candidate DPP-IV inhibitors were identified and their docking modes were analyzed. In vitro activity verification showed that all three MO components had certain DPP-IV inhibitory activities, of which O-Ethyl-4-[(α-l-rhamnosyloxy)-benzyl] carbamate (compound 1) had the highest activity (half-maximal inhibitory concentration [IC(50)] = 798 nM). This study provides a reference for exploring the molecular mechanisms underlying the anti-diabetic activity of MO. The obtained DPP-IV inhibitors could be used for structural optimization and in-depth in vivo evaluation. MDPI 2020-01-02 /pmc/articles/PMC6983023/ /pubmed/31906524 http://dx.doi.org/10.3390/molecules25010189 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yang, Yang Shi, Chong-Yin Xie, Jing Dai, Jia-He He, Shui-Lian Tian, Yang Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title | Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title_full | Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title_fullStr | Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title_full_unstemmed | Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title_short | Identification of Potential Dipeptidyl Peptidase (DPP)-IV Inhibitors among Moringa oleifera Phytochemicals by Virtual Screening, Molecular Docking Analysis, ADME/T-Based Prediction, and In Vitro Analyses |
title_sort | identification of potential dipeptidyl peptidase (dpp)-iv inhibitors among moringa oleifera phytochemicals by virtual screening, molecular docking analysis, adme/t-based prediction, and in vitro analyses |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983023/ https://www.ncbi.nlm.nih.gov/pubmed/31906524 http://dx.doi.org/10.3390/molecules25010189 |
work_keys_str_mv | AT yangyang identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses AT shichongyin identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses AT xiejing identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses AT daijiahe identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses AT heshuilian identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses AT tianyang identificationofpotentialdipeptidylpeptidasedppivinhibitorsamongmoringaoleiferaphytochemicalsbyvirtualscreeningmoleculardockinganalysisadmetbasedpredictionandinvitroanalyses |