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Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals?
The use of centroids of localized orbitals as a method to derive oxidation states (OS) from first-principles is critically analyzed. We explore the performance of the closest-atom distance criterion to assign electrons for a number of challenging systems, including high-valent transition metal compo...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983110/ https://www.ncbi.nlm.nih.gov/pubmed/31935971 http://dx.doi.org/10.3390/molecules25010234 |
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author | Gimferrer, Martí Comas-Vilà, Gerard Salvador, Pedro |
author_facet | Gimferrer, Martí Comas-Vilà, Gerard Salvador, Pedro |
author_sort | Gimferrer, Martí |
collection | PubMed |
description | The use of centroids of localized orbitals as a method to derive oxidation states (OS) from first-principles is critically analyzed. We explore the performance of the closest-atom distance criterion to assign electrons for a number of challenging systems, including high-valent transition metal compounds, π-adducts, and transition metal (TM) carbenes. Here, we also introduce a mixed approach that combines the position of the centroids with Bader’s atomic basins as an alternative criterion for electron assignment. The closest-atom criterion performs reasonably well for the challenging systems, but wrongly considers O-H and N-H bonds as hydrides. The new criterion fixes this problem, but underperforms in the case of TM carbenes. Moreover, the OS assignment in dubious cases exhibit undesirable dependence on the particular choice for orbital localization. |
format | Online Article Text |
id | pubmed-6983110 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-69831102020-02-06 Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? Gimferrer, Martí Comas-Vilà, Gerard Salvador, Pedro Molecules Article The use of centroids of localized orbitals as a method to derive oxidation states (OS) from first-principles is critically analyzed. We explore the performance of the closest-atom distance criterion to assign electrons for a number of challenging systems, including high-valent transition metal compounds, π-adducts, and transition metal (TM) carbenes. Here, we also introduce a mixed approach that combines the position of the centroids with Bader’s atomic basins as an alternative criterion for electron assignment. The closest-atom criterion performs reasonably well for the challenging systems, but wrongly considers O-H and N-H bonds as hydrides. The new criterion fixes this problem, but underperforms in the case of TM carbenes. Moreover, the OS assignment in dubious cases exhibit undesirable dependence on the particular choice for orbital localization. MDPI 2020-01-06 /pmc/articles/PMC6983110/ /pubmed/31935971 http://dx.doi.org/10.3390/molecules25010234 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gimferrer, Martí Comas-Vilà, Gerard Salvador, Pedro Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title | Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title_full | Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title_fullStr | Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title_full_unstemmed | Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title_short | Can We Safely Obtain Formal Oxidation States from Centroids of Localized Orbitals? |
title_sort | can we safely obtain formal oxidation states from centroids of localized orbitals? |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983110/ https://www.ncbi.nlm.nih.gov/pubmed/31935971 http://dx.doi.org/10.3390/molecules25010234 |
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