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Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction

Density prediction is of great significance for molecular design of energetic materials, since detonation velocity linearly with density and detonation pressure increases with the density squared. However, the accuracy and generalization of former reported prediction models need further improvement,...

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Detalles Bibliográficos
Autores principales: Wang, Linyuan, Zhang, Miao, Chen, Jie, Su, Liang, Zhao, Shicao, Zhang, Chaoyang, Liu, Jian, Chen, Chunyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983118/
https://www.ncbi.nlm.nih.gov/pubmed/31906099
http://dx.doi.org/10.3390/molecules25010161
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author Wang, Linyuan
Zhang, Miao
Chen, Jie
Su, Liang
Zhao, Shicao
Zhang, Chaoyang
Liu, Jian
Chen, Chunyan
author_facet Wang, Linyuan
Zhang, Miao
Chen, Jie
Su, Liang
Zhao, Shicao
Zhang, Chaoyang
Liu, Jian
Chen, Chunyan
author_sort Wang, Linyuan
collection PubMed
description Density prediction is of great significance for molecular design of energetic materials, since detonation velocity linearly with density and detonation pressure increases with the density squared. However, the accuracy and generalization of former reported prediction models need further improvement, because most of them are derived from small data sets and few molecular descriptors. As shown in this paper, for molecules presenting brick-like shape or containing more hydrogen-bond donors the predicted densities have large negative deviations from experimental values. Thus, a molecular morphology descriptor η and a hydrogen-bond descriptor H(b) are introduced as correction items to build 3 new QSPR models. Besides, 3694 nitro compounds are adopted as data set by this work. The accuracies are obviously improved, and the generalizations are verified by an independent test set. At the level of B3PW91/6-31G(d,p), the effective ratios (ERs) of the 3 Equations, for Δρ < 5%, are 92.7%, 91.8%, and 93.3%; for Δρ < 2%, the values are 53.5%, 51.3%, and 54.7%. At the level of B3LYP/6-31G**, for Δρ < 5%, the values are 92.3%, 91.4% and 92.9%; for Δρ < 2%, the values are 53.7%, 51.4% and 53.2%.
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spelling pubmed-69831182020-02-06 Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction Wang, Linyuan Zhang, Miao Chen, Jie Su, Liang Zhao, Shicao Zhang, Chaoyang Liu, Jian Chen, Chunyan Molecules Article Density prediction is of great significance for molecular design of energetic materials, since detonation velocity linearly with density and detonation pressure increases with the density squared. However, the accuracy and generalization of former reported prediction models need further improvement, because most of them are derived from small data sets and few molecular descriptors. As shown in this paper, for molecules presenting brick-like shape or containing more hydrogen-bond donors the predicted densities have large negative deviations from experimental values. Thus, a molecular morphology descriptor η and a hydrogen-bond descriptor H(b) are introduced as correction items to build 3 new QSPR models. Besides, 3694 nitro compounds are adopted as data set by this work. The accuracies are obviously improved, and the generalizations are verified by an independent test set. At the level of B3PW91/6-31G(d,p), the effective ratios (ERs) of the 3 Equations, for Δρ < 5%, are 92.7%, 91.8%, and 93.3%; for Δρ < 2%, the values are 53.5%, 51.3%, and 54.7%. At the level of B3LYP/6-31G**, for Δρ < 5%, the values are 92.3%, 91.4% and 92.9%; for Δρ < 2%, the values are 53.7%, 51.4% and 53.2%. MDPI 2019-12-31 /pmc/articles/PMC6983118/ /pubmed/31906099 http://dx.doi.org/10.3390/molecules25010161 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Linyuan
Zhang, Miao
Chen, Jie
Su, Liang
Zhao, Shicao
Zhang, Chaoyang
Liu, Jian
Chen, Chunyan
Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title_full Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title_fullStr Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title_full_unstemmed Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title_short Corrections of Molecular Morphology and Hydrogen Bond for Improved Crystal Density Prediction
title_sort corrections of molecular morphology and hydrogen bond for improved crystal density prediction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983118/
https://www.ncbi.nlm.nih.gov/pubmed/31906099
http://dx.doi.org/10.3390/molecules25010161
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