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A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis
BACKGROUND: Previous GWASs have revealed several susceptible variants associated with adolescent idiopathic scoliosis (AIS). Risk prediction based on these variants can potentially improve disease prognosis. We aimed to evaluate the combined effects of genetic factors on the development of AIS and t...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Bentham Science Publishers
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983957/ https://www.ncbi.nlm.nih.gov/pubmed/32030084 http://dx.doi.org/10.2174/1389202920666190730132411 |
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author | Xu, Leilei Wu, Zhichong Xia, Chao Tang, Nelson Cheng, Jack C.Y. Qiu, Yong Zhu, ZeZhang |
author_facet | Xu, Leilei Wu, Zhichong Xia, Chao Tang, Nelson Cheng, Jack C.Y. Qiu, Yong Zhu, ZeZhang |
author_sort | Xu, Leilei |
collection | PubMed |
description | BACKGROUND: Previous GWASs have revealed several susceptible variants associated with adolescent idiopathic scoliosis (AIS). Risk prediction based on these variants can potentially improve disease prognosis. We aimed to evaluate the combined effects of genetic factors on the development of AIS and to further develop a genetic predictive model. METHODS: A total of 914 AIS patients and 1441 normal controls were included in the discovery stage, which was followed by the replication stage composed of 871 patients and 1239 controls. Genotyping assay was performed to analyze 10 previously reported susceptible variants, including rs678741 of LBX1, rs241215 of AJAP1, rs13398147 of PAX3, rs16934784 of BNC2, rs2050157 of GPR126, rs2180439 of PAX1, rs4940576 of BCL2, rs7593846 of MEIS1, rs7633294 of MAGI1 and rs9810566 of TNIK. Logistic regression analysis was performed to generate a risk predictive model. The predicted risk score was calculated for each participant in the replication stage. RESULTS: The association of the 10 variants with AIS was successfully validated. The established model could explain approximately 7.9% of the overall variance. In the replication stage, patients were found to have a remarkably higher risk score as compared to the controls (44.2 ± 14.4 vs. 33.9 ± 12.5, p <0.001). There was a remarkably higher proportion of the risk score i.e. >40 in the patients than in the controls (59% vs. 28.9%, p <0.001). CONCLUSION: Risk predictive model based on the previously reported genetic variants has a remarkable discriminative power. More clinical and genetic factors need to be studied, to further improve the proba-bility to predict the onset of AIS. |
format | Online Article Text |
id | pubmed-6983957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Bentham Science Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-69839572020-02-06 A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis Xu, Leilei Wu, Zhichong Xia, Chao Tang, Nelson Cheng, Jack C.Y. Qiu, Yong Zhu, ZeZhang Curr Genomics Article BACKGROUND: Previous GWASs have revealed several susceptible variants associated with adolescent idiopathic scoliosis (AIS). Risk prediction based on these variants can potentially improve disease prognosis. We aimed to evaluate the combined effects of genetic factors on the development of AIS and to further develop a genetic predictive model. METHODS: A total of 914 AIS patients and 1441 normal controls were included in the discovery stage, which was followed by the replication stage composed of 871 patients and 1239 controls. Genotyping assay was performed to analyze 10 previously reported susceptible variants, including rs678741 of LBX1, rs241215 of AJAP1, rs13398147 of PAX3, rs16934784 of BNC2, rs2050157 of GPR126, rs2180439 of PAX1, rs4940576 of BCL2, rs7593846 of MEIS1, rs7633294 of MAGI1 and rs9810566 of TNIK. Logistic regression analysis was performed to generate a risk predictive model. The predicted risk score was calculated for each participant in the replication stage. RESULTS: The association of the 10 variants with AIS was successfully validated. The established model could explain approximately 7.9% of the overall variance. In the replication stage, patients were found to have a remarkably higher risk score as compared to the controls (44.2 ± 14.4 vs. 33.9 ± 12.5, p <0.001). There was a remarkably higher proportion of the risk score i.e. >40 in the patients than in the controls (59% vs. 28.9%, p <0.001). CONCLUSION: Risk predictive model based on the previously reported genetic variants has a remarkable discriminative power. More clinical and genetic factors need to be studied, to further improve the proba-bility to predict the onset of AIS. Bentham Science Publishers 2019-05 2019-05 /pmc/articles/PMC6983957/ /pubmed/32030084 http://dx.doi.org/10.2174/1389202920666190730132411 Text en © 2019 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited. |
spellingShingle | Article Xu, Leilei Wu, Zhichong Xia, Chao Tang, Nelson Cheng, Jack C.Y. Qiu, Yong Zhu, ZeZhang A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title | A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title_full | A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title_fullStr | A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title_full_unstemmed | A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title_short | A Genetic Predictive Model Estimating the Risk of Developing Adolescent Idiopathic Scoliosis |
title_sort | genetic predictive model estimating the risk of developing adolescent idiopathic scoliosis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983957/ https://www.ncbi.nlm.nih.gov/pubmed/32030084 http://dx.doi.org/10.2174/1389202920666190730132411 |
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