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Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu

Pufferfish (Takifugu spp.) are economically important edible marine fish. Mistakes in pufferfish classification can lead to poisoning; therefore, accurate species identification is critical. In this study, we used the mtDNA cytochrome c oxidase subunit I gene (COI) to design specific primers for six...

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Autores principales: Dong, Chun Mae, Park, Yeon Jung, Noh, Jae Koo, Noh, Eun Soo, An, Cheul Min, Kang, Jung-Ha, Park, Jung Youn, Kim, Eun-Mi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Developmental Biology 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985294/
https://www.ncbi.nlm.nih.gov/pubmed/31993542
http://dx.doi.org/10.12717/DR.2019.23.4.367
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author Dong, Chun Mae
Park, Yeon Jung
Noh, Jae Koo
Noh, Eun Soo
An, Cheul Min
Kang, Jung-Ha
Park, Jung Youn
Kim, Eun-Mi
author_facet Dong, Chun Mae
Park, Yeon Jung
Noh, Jae Koo
Noh, Eun Soo
An, Cheul Min
Kang, Jung-Ha
Park, Jung Youn
Kim, Eun-Mi
author_sort Dong, Chun Mae
collection PubMed
description Pufferfish (Takifugu spp.) are economically important edible marine fish. Mistakes in pufferfish classification can lead to poisoning; therefore, accurate species identification is critical. In this study, we used the mtDNA cytochrome c oxidase subunit I gene (COI) to design specific primers for six Takifugu species among the 21 domestic or imported pufferfish species legally sold for consumption in Korea. We rapidly and simultaneously identified these pufferfish species using a highly efficient, multiplex polymerase chain reaction (PCR) system with the six species-specific primers. The results showed that species-specific multiplex PCR (multiplex species-specific polymerase chain reaction; MSS-PCR) either specifically amplified PCR products of a unique size or failed. MSS-PCR yielded amplification fragment lengths of 897 bp for Takifugu pardalis, 822 bp for T. porphyreus, 667 bp for T. niphobles, 454 bp for T. poecilonotus, 366 bp for T. rubripes, and 230 bp for T. xanthpterus using the species-specific primers and a control primer (ca. 1,200 bp). We visualized the results using agarose gel electrophoresis to obtain accurate contrasts of the six Takifugu species. MSS-PCR analysis is easily performed and provides identification results within 6 h. This technique is a powerful tool for the discrimination of Takifugu species and will help prevent falsified labeling, protect consumer rights, and reduce the risk of pufferfish poisoning..
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spelling pubmed-69852942020-01-28 Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu Dong, Chun Mae Park, Yeon Jung Noh, Jae Koo Noh, Eun Soo An, Cheul Min Kang, Jung-Ha Park, Jung Youn Kim, Eun-Mi Dev Reprod Short Communication Pufferfish (Takifugu spp.) are economically important edible marine fish. Mistakes in pufferfish classification can lead to poisoning; therefore, accurate species identification is critical. In this study, we used the mtDNA cytochrome c oxidase subunit I gene (COI) to design specific primers for six Takifugu species among the 21 domestic or imported pufferfish species legally sold for consumption in Korea. We rapidly and simultaneously identified these pufferfish species using a highly efficient, multiplex polymerase chain reaction (PCR) system with the six species-specific primers. The results showed that species-specific multiplex PCR (multiplex species-specific polymerase chain reaction; MSS-PCR) either specifically amplified PCR products of a unique size or failed. MSS-PCR yielded amplification fragment lengths of 897 bp for Takifugu pardalis, 822 bp for T. porphyreus, 667 bp for T. niphobles, 454 bp for T. poecilonotus, 366 bp for T. rubripes, and 230 bp for T. xanthpterus using the species-specific primers and a control primer (ca. 1,200 bp). We visualized the results using agarose gel electrophoresis to obtain accurate contrasts of the six Takifugu species. MSS-PCR analysis is easily performed and provides identification results within 6 h. This technique is a powerful tool for the discrimination of Takifugu species and will help prevent falsified labeling, protect consumer rights, and reduce the risk of pufferfish poisoning.. Korean Society of Developmental Biology 2019-12 2019-12-31 /pmc/articles/PMC6985294/ /pubmed/31993542 http://dx.doi.org/10.12717/DR.2019.23.4.367 Text en Copyright 2019 The Korean Society of Developmental Biology http://creative-commons.org/licenses/by-nc/3.0/ This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creative-commons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Communication
Dong, Chun Mae
Park, Yeon Jung
Noh, Jae Koo
Noh, Eun Soo
An, Cheul Min
Kang, Jung-Ha
Park, Jung Youn
Kim, Eun-Mi
Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title_full Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title_fullStr Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title_full_unstemmed Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title_short Development of Species-Specific PCR Primers for the Rapid and Simultaneous Identification of the Six Species of Genus Takifugu
title_sort development of species-specific pcr primers for the rapid and simultaneous identification of the six species of genus takifugu
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985294/
https://www.ncbi.nlm.nih.gov/pubmed/31993542
http://dx.doi.org/10.12717/DR.2019.23.4.367
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