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TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus
Adaptations to low temperature play a critical role in restricting the geographical distribution of insects. Decreasing day lengths and temperatures trigger seasonal cold adaptations in insects. These adaptions include changes in expression at the miRNA, mRNA and protein levels. The rice water weevi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985562/ https://www.ncbi.nlm.nih.gov/pubmed/32038298 http://dx.doi.org/10.3389/fphys.2019.01623 |
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author | Xinxin, Zhang Shuang, Yang Xunming, Zhang Shang, Wang Juhong, Zhang Jinghui, Xi |
author_facet | Xinxin, Zhang Shuang, Yang Xunming, Zhang Shang, Wang Juhong, Zhang Jinghui, Xi |
author_sort | Xinxin, Zhang |
collection | PubMed |
description | Adaptations to low temperature play a critical role in restricting the geographical distribution of insects. Decreasing day lengths and temperatures trigger seasonal cold adaptations in insects. These adaptions include changes in expression at the miRNA, mRNA and protein levels. The rice water weevil (RWW), Lissorhoptrus oryzophilus, introduced from the Mississippi River, is a globally invasive pest of wetland rice that can survive at the northern border of China. To investigate the changes in expression at the protein level in overwintering female RWW adults, 6-plex tandem mass tags (TMTs) were used in overwintering and summer adults. By using a proteome database available for Curculionidae, 1077 proteins were quantified, 183 of which differed significantly between the overwintering and summer samples. To further understand these differentially expressed proteins (DEPs), bioinformatics analyses such as gene ontology (GO) enrichment analyses were performed. DEPs associated with the terms binding, structural molecule activity, catalytic activity, multicellular organismal process, extracellular region, chitin binding, metabolic process, intracellular part and organic cyclic compound binding were altered by selection during winter. The changes in the expression of these proteins suggest that the proteins are important for RWW survival in winter. |
format | Online Article Text |
id | pubmed-6985562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-69855622020-02-07 TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus Xinxin, Zhang Shuang, Yang Xunming, Zhang Shang, Wang Juhong, Zhang Jinghui, Xi Front Physiol Physiology Adaptations to low temperature play a critical role in restricting the geographical distribution of insects. Decreasing day lengths and temperatures trigger seasonal cold adaptations in insects. These adaptions include changes in expression at the miRNA, mRNA and protein levels. The rice water weevil (RWW), Lissorhoptrus oryzophilus, introduced from the Mississippi River, is a globally invasive pest of wetland rice that can survive at the northern border of China. To investigate the changes in expression at the protein level in overwintering female RWW adults, 6-plex tandem mass tags (TMTs) were used in overwintering and summer adults. By using a proteome database available for Curculionidae, 1077 proteins were quantified, 183 of which differed significantly between the overwintering and summer samples. To further understand these differentially expressed proteins (DEPs), bioinformatics analyses such as gene ontology (GO) enrichment analyses were performed. DEPs associated with the terms binding, structural molecule activity, catalytic activity, multicellular organismal process, extracellular region, chitin binding, metabolic process, intracellular part and organic cyclic compound binding were altered by selection during winter. The changes in the expression of these proteins suggest that the proteins are important for RWW survival in winter. Frontiers Media S.A. 2020-01-21 /pmc/articles/PMC6985562/ /pubmed/32038298 http://dx.doi.org/10.3389/fphys.2019.01623 Text en Copyright © 2020 Xinxin, Shuang, Xunming, Shang, Juhong and Jinghui. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Xinxin, Zhang Shuang, Yang Xunming, Zhang Shang, Wang Juhong, Zhang Jinghui, Xi TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title | TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title_full | TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title_fullStr | TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title_full_unstemmed | TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title_short | TMT-Based Quantitative Proteomic Profiling of Overwintering Lissorhoptrus oryzophilus |
title_sort | tmt-based quantitative proteomic profiling of overwintering lissorhoptrus oryzophilus |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985562/ https://www.ncbi.nlm.nih.gov/pubmed/32038298 http://dx.doi.org/10.3389/fphys.2019.01623 |
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