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Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness
Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced...
| Autores principales: | , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Centers for Disease Control and Prevention
2020
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6986837/ https://www.ncbi.nlm.nih.gov/pubmed/31961318 http://dx.doi.org/10.3201/eid2602.191351 |
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| author | McLaughlin, Heather P. Bugrysheva, Julia V. Conley, Andrew B. Gulvik, Christopher A. Cherney, Blake Kolton, Cari B. Marston, Chung K. Saile, Elke Swaney, Erin Lonsway, David Gargis, Amy S. Kongphet-Tran, Thiphasone Lascols, Christine Michel, Pierre Villanueva, Julie Hoffmaster, Alex R. Gee, Jay E. Sue, David |
| author_facet | McLaughlin, Heather P. Bugrysheva, Julia V. Conley, Andrew B. Gulvik, Christopher A. Cherney, Blake Kolton, Cari B. Marston, Chung K. Saile, Elke Swaney, Erin Lonsway, David Gargis, Amy S. Kongphet-Tran, Thiphasone Lascols, Christine Michel, Pierre Villanueva, Julie Hoffmaster, Alex R. Gee, Jay E. Sue, David |
| author_sort | McLaughlin, Heather P. |
| collection | PubMed |
| description | Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced plasmid(s). Same-day genomic characterization enhances public health emergency response. |
| format | Online Article Text |
| id | pubmed-6986837 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2020 |
| publisher | Centers for Disease Control and Prevention |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-69868372020-02-06 Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness McLaughlin, Heather P. Bugrysheva, Julia V. Conley, Andrew B. Gulvik, Christopher A. Cherney, Blake Kolton, Cari B. Marston, Chung K. Saile, Elke Swaney, Erin Lonsway, David Gargis, Amy S. Kongphet-Tran, Thiphasone Lascols, Christine Michel, Pierre Villanueva, Julie Hoffmaster, Alex R. Gee, Jay E. Sue, David Emerg Infect Dis Dispatch Human anthrax cases necessitate rapid response. We completed Bacillus anthracis nanopore whole-genome sequencing in our high-containment laboratory from a human anthrax isolate hours after receipt. The de novo assembled genome showed no evidence of known antimicrobial resistance genes or introduced plasmid(s). Same-day genomic characterization enhances public health emergency response. Centers for Disease Control and Prevention 2020-02 /pmc/articles/PMC6986837/ /pubmed/31961318 http://dx.doi.org/10.3201/eid2602.191351 Text en https://creativecommons.org/licenses/by/4.0/This is a publication of the U.S. Government. This publication is in the public domain and is therefore without copyright. All text from this work may be reprinted freely. Use of these materials should be properly cited. |
| spellingShingle | Dispatch McLaughlin, Heather P. Bugrysheva, Julia V. Conley, Andrew B. Gulvik, Christopher A. Cherney, Blake Kolton, Cari B. Marston, Chung K. Saile, Elke Swaney, Erin Lonsway, David Gargis, Amy S. Kongphet-Tran, Thiphasone Lascols, Christine Michel, Pierre Villanueva, Julie Hoffmaster, Alex R. Gee, Jay E. Sue, David Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_full | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_fullStr | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_full_unstemmed | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_short | Rapid Nanopore Whole-Genome Sequencing for Anthrax Emergency Preparedness |
| title_sort | rapid nanopore whole-genome sequencing for anthrax emergency preparedness |
| topic | Dispatch |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6986837/ https://www.ncbi.nlm.nih.gov/pubmed/31961318 http://dx.doi.org/10.3201/eid2602.191351 |
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