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Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy

The population of adults with Alzheimer’s disease (AD) varies in needs and outcomes. The heterogeneity of current AD diagnostic subgroups impedes the use of data analytics in clinical trial design and translation of findings into improved care. The purpose of this project was to define more clinical...

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Autores principales: Mitelpunkt, Alexis, Galili, Tal, Kozlovski, Tal, Bregman, Noa, Shachar, Netta, Markus-Kalish, Mira, Benjamini, Yoav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6987140/
https://www.ncbi.nlm.nih.gov/pubmed/31992745
http://dx.doi.org/10.1038/s41598-020-57785-2
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author Mitelpunkt, Alexis
Galili, Tal
Kozlovski, Tal
Bregman, Noa
Shachar, Netta
Markus-Kalish, Mira
Benjamini, Yoav
author_facet Mitelpunkt, Alexis
Galili, Tal
Kozlovski, Tal
Bregman, Noa
Shachar, Netta
Markus-Kalish, Mira
Benjamini, Yoav
author_sort Mitelpunkt, Alexis
collection PubMed
description The population of adults with Alzheimer’s disease (AD) varies in needs and outcomes. The heterogeneity of current AD diagnostic subgroups impedes the use of data analytics in clinical trial design and translation of findings into improved care. The purpose of this project was to define more clinically-homogeneous groups of AD patients and link clinical characteristics with biological markers. We used an innovative big data analysis strategy, the 3C strategy, that incorporates medical knowledge into the data analysis process. A large set of preprocessed AD Neuroimaging Initiative (ADNI) data was analyzed with 3C. The data analysis yielded 6 new disease subtypes, which differ from the assigned diagnosis types and present different patterns of clinical measures and potential biomarkers. Two of the subtypes, “Anosognosia dementia” and “Insightful dementia”, differentiate between severe participants based on clinical characteristics and biomarkers. The “Uncompensated mild cognitive impairment (MCI)” subtype, demonstrates clinical, demographic and imaging differences from the “Affective MCI” subtype. Differences were also observed between the “Worried Well” and “Healthy” clusters. The use of data-driven analysis yielded sub-phenotypic clinical clusters that go beyond current diagnoses and are associated with biomarkers. Such homogenous sub-groups can potentially form the basis for enhancement of brain medicine research.
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spelling pubmed-69871402020-01-31 Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy Mitelpunkt, Alexis Galili, Tal Kozlovski, Tal Bregman, Noa Shachar, Netta Markus-Kalish, Mira Benjamini, Yoav Sci Rep Article The population of adults with Alzheimer’s disease (AD) varies in needs and outcomes. The heterogeneity of current AD diagnostic subgroups impedes the use of data analytics in clinical trial design and translation of findings into improved care. The purpose of this project was to define more clinically-homogeneous groups of AD patients and link clinical characteristics with biological markers. We used an innovative big data analysis strategy, the 3C strategy, that incorporates medical knowledge into the data analysis process. A large set of preprocessed AD Neuroimaging Initiative (ADNI) data was analyzed with 3C. The data analysis yielded 6 new disease subtypes, which differ from the assigned diagnosis types and present different patterns of clinical measures and potential biomarkers. Two of the subtypes, “Anosognosia dementia” and “Insightful dementia”, differentiate between severe participants based on clinical characteristics and biomarkers. The “Uncompensated mild cognitive impairment (MCI)” subtype, demonstrates clinical, demographic and imaging differences from the “Affective MCI” subtype. Differences were also observed between the “Worried Well” and “Healthy” clusters. The use of data-driven analysis yielded sub-phenotypic clinical clusters that go beyond current diagnoses and are associated with biomarkers. Such homogenous sub-groups can potentially form the basis for enhancement of brain medicine research. Nature Publishing Group UK 2020-01-28 /pmc/articles/PMC6987140/ /pubmed/31992745 http://dx.doi.org/10.1038/s41598-020-57785-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Mitelpunkt, Alexis
Galili, Tal
Kozlovski, Tal
Bregman, Noa
Shachar, Netta
Markus-Kalish, Mira
Benjamini, Yoav
Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title_full Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title_fullStr Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title_full_unstemmed Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title_short Novel Alzheimer’s disease subtypes identified using a data and knowledge driven strategy
title_sort novel alzheimer’s disease subtypes identified using a data and knowledge driven strategy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6987140/
https://www.ncbi.nlm.nih.gov/pubmed/31992745
http://dx.doi.org/10.1038/s41598-020-57785-2
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