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Mitogenome evolution in ladybirds: Potential association with dietary adaptation

Dietary shifts can alter the relative availability of different nutrients and are therefore associated with metabolic adaptation in animals. The Coccinellidae (ladybirds) exhibits three major types of feeding habits and provides a useful model to study the effects of dietary changes on the evolution...

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Autores principales: Yuan, Ming‐Long, Zhang, Li‐Jun, Zhang, Qi‐Lin, Zhang, Li, Li, Min, Wang, Xiao‐Tong, Feng, Run‐Qiu, Tang, Pei‐An
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6988538/
https://www.ncbi.nlm.nih.gov/pubmed/32015863
http://dx.doi.org/10.1002/ece3.5971
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author Yuan, Ming‐Long
Zhang, Li‐Jun
Zhang, Qi‐Lin
Zhang, Li
Li, Min
Wang, Xiao‐Tong
Feng, Run‐Qiu
Tang, Pei‐An
author_facet Yuan, Ming‐Long
Zhang, Li‐Jun
Zhang, Qi‐Lin
Zhang, Li
Li, Min
Wang, Xiao‐Tong
Feng, Run‐Qiu
Tang, Pei‐An
author_sort Yuan, Ming‐Long
collection PubMed
description Dietary shifts can alter the relative availability of different nutrients and are therefore associated with metabolic adaptation in animals. The Coccinellidae (ladybirds) exhibits three major types of feeding habits and provides a useful model to study the effects of dietary changes on the evolution of mitogenomes, which encode proteins directly involved in energy metabolism. Here, mitogenomes of three coccinellid species were newly sequenced. These data were combined with other ten previously sequenced coccinellid mitogenomes to explore the relationship between mitogenome evolution and diets. Our results indicate that mitogenomic data can be effectively used to resolve phylogenetic relationships of Coccinellidae. Strong codon usage bias in coccinellid mitogenomes was predominantly determined by nucleotide composition. The 13 mitochondrial protein‐coding genes (PCGs) globally evolved under negative constraints, with some PCGs showing a stronger purifying selection. Six PCGs (nad3, nad4L, and nad5 from Complex I; cox1 and cox3 from Complex IV; and atp6 from Complex V) displayed signs of positive selection. Of these, adaptive changes in cox3 were potentially associated with metabolic differences resulting from dietary shifts in Coccinellidae. Our results provide insights into the adaptive evolution of coccinellid mitogenomes in response to both dietary shifts and other life history traits.
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spelling pubmed-69885382020-02-03 Mitogenome evolution in ladybirds: Potential association with dietary adaptation Yuan, Ming‐Long Zhang, Li‐Jun Zhang, Qi‐Lin Zhang, Li Li, Min Wang, Xiao‐Tong Feng, Run‐Qiu Tang, Pei‐An Ecol Evol Original Research Dietary shifts can alter the relative availability of different nutrients and are therefore associated with metabolic adaptation in animals. The Coccinellidae (ladybirds) exhibits three major types of feeding habits and provides a useful model to study the effects of dietary changes on the evolution of mitogenomes, which encode proteins directly involved in energy metabolism. Here, mitogenomes of three coccinellid species were newly sequenced. These data were combined with other ten previously sequenced coccinellid mitogenomes to explore the relationship between mitogenome evolution and diets. Our results indicate that mitogenomic data can be effectively used to resolve phylogenetic relationships of Coccinellidae. Strong codon usage bias in coccinellid mitogenomes was predominantly determined by nucleotide composition. The 13 mitochondrial protein‐coding genes (PCGs) globally evolved under negative constraints, with some PCGs showing a stronger purifying selection. Six PCGs (nad3, nad4L, and nad5 from Complex I; cox1 and cox3 from Complex IV; and atp6 from Complex V) displayed signs of positive selection. Of these, adaptive changes in cox3 were potentially associated with metabolic differences resulting from dietary shifts in Coccinellidae. Our results provide insights into the adaptive evolution of coccinellid mitogenomes in response to both dietary shifts and other life history traits. John Wiley and Sons Inc. 2020-01-02 /pmc/articles/PMC6988538/ /pubmed/32015863 http://dx.doi.org/10.1002/ece3.5971 Text en © 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Yuan, Ming‐Long
Zhang, Li‐Jun
Zhang, Qi‐Lin
Zhang, Li
Li, Min
Wang, Xiao‐Tong
Feng, Run‐Qiu
Tang, Pei‐An
Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title_full Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title_fullStr Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title_full_unstemmed Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title_short Mitogenome evolution in ladybirds: Potential association with dietary adaptation
title_sort mitogenome evolution in ladybirds: potential association with dietary adaptation
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6988538/
https://www.ncbi.nlm.nih.gov/pubmed/32015863
http://dx.doi.org/10.1002/ece3.5971
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