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Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery

Helosciadium repens (Jacq.) W.D.J. Koch is threatened by genetic erosion. It is a Crop Wild Relative (CWR) of celery and celeriac and a potentially valuable genetic resource for plant breeding. The objective of this study was the analysis of distribution of genetic diversity with a set of selected p...

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Autores principales: Herden, Tobias, Bönisch, Maria, Friesen, Nikolai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6988547/
https://www.ncbi.nlm.nih.gov/pubmed/32015851
http://dx.doi.org/10.1002/ece3.5947
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author Herden, Tobias
Bönisch, Maria
Friesen, Nikolai
author_facet Herden, Tobias
Bönisch, Maria
Friesen, Nikolai
author_sort Herden, Tobias
collection PubMed
description Helosciadium repens (Jacq.) W.D.J. Koch is threatened by genetic erosion. It is a Crop Wild Relative (CWR) of celery and celeriac and a potentially valuable genetic resource for plant breeding. The objective of this study was the analysis of distribution of genetic diversity with a set of selected populations in Germany. The results of the genetic analysis and data obtained during the site visits were used to identify a subset which was chosen to best represent the genetic diversity of H. repens in Germany. The chance of long‐term conservation by securing the identified populations in genetic reserves is distinctly possible. Seven hundred and fifteen individuals from 27 sites were assessed using six simple sequence repeat markers. Discriminant analysis of principal components was used to identify six clusters of genetically similar individuals. The complementary compositional genetic differentiation Δj was calculated to designate a subset of populations chosen to best represent the overall genetic diversity. Entry 18R (Δ(18R) = 0.2498) represented its pooled remainder the best, while entry 22R (Δ(22R) = 0.4902) differed the most from its complement. Based on the results of the genetic analysis and information regarding the current conservation status, 14 most appropriate wild populations for potential genetic reserve were identified. The used markers display a low level of genetic variation between the analyzed populations, and a split between Northern and Southern populations was observed. CWR species are essential genetic resources for plant breeding and food security. However, 11.5% of the European CWRs are threatened. Therefore, it is of utmost importance to determine their genetic compositions. These insights will provide the fundamental basis for making crucial decisions concerning future conservation strategies for H. repens.
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spelling pubmed-69885472020-02-03 Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery Herden, Tobias Bönisch, Maria Friesen, Nikolai Ecol Evol Original Research Helosciadium repens (Jacq.) W.D.J. Koch is threatened by genetic erosion. It is a Crop Wild Relative (CWR) of celery and celeriac and a potentially valuable genetic resource for plant breeding. The objective of this study was the analysis of distribution of genetic diversity with a set of selected populations in Germany. The results of the genetic analysis and data obtained during the site visits were used to identify a subset which was chosen to best represent the genetic diversity of H. repens in Germany. The chance of long‐term conservation by securing the identified populations in genetic reserves is distinctly possible. Seven hundred and fifteen individuals from 27 sites were assessed using six simple sequence repeat markers. Discriminant analysis of principal components was used to identify six clusters of genetically similar individuals. The complementary compositional genetic differentiation Δj was calculated to designate a subset of populations chosen to best represent the overall genetic diversity. Entry 18R (Δ(18R) = 0.2498) represented its pooled remainder the best, while entry 22R (Δ(22R) = 0.4902) differed the most from its complement. Based on the results of the genetic analysis and information regarding the current conservation status, 14 most appropriate wild populations for potential genetic reserve were identified. The used markers display a low level of genetic variation between the analyzed populations, and a split between Northern and Southern populations was observed. CWR species are essential genetic resources for plant breeding and food security. However, 11.5% of the European CWRs are threatened. Therefore, it is of utmost importance to determine their genetic compositions. These insights will provide the fundamental basis for making crucial decisions concerning future conservation strategies for H. repens. John Wiley and Sons Inc. 2019-12-17 /pmc/articles/PMC6988547/ /pubmed/32015851 http://dx.doi.org/10.1002/ece3.5947 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Herden, Tobias
Bönisch, Maria
Friesen, Nikolai
Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title_full Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title_fullStr Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title_full_unstemmed Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title_short Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
title_sort genetic diversity of helosciadium repens (jacq.) w.d.j. koch (apiaceae) in germany, a crop wild relative of celery
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6988547/
https://www.ncbi.nlm.nih.gov/pubmed/32015851
http://dx.doi.org/10.1002/ece3.5947
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