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From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation i...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989119/ https://www.ncbi.nlm.nih.gov/pubmed/31895038 http://dx.doi.org/10.7554/eLife.52882 |
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author | Karpenko, Sophia Wolf, Sebastien Lafaye, Julie Le Goc, Guillaume Panier, Thomas Bormuth, Volker Candelier, Raphaël Debrégeas, Georges |
author_facet | Karpenko, Sophia Wolf, Sebastien Lafaye, Julie Le Goc, Guillaume Panier, Thomas Bormuth, Volker Candelier, Raphaël Debrégeas, Georges |
author_sort | Karpenko, Sophia |
collection | PubMed |
description | Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation in zebrafish larvae. Using a virtual reality assay, we first characterize how motor and visual stimulation sequences govern the selection of discrete swim-bout events that subserve the fish navigation in the presence of a distant light source. These mechanisms are combined into a comprehensive Markov-chain model of navigation that quantitatively predicts the stationary distribution of the fish’s body orientation under any given illumination profile. We then map this behavioral description onto a neuronal model of the ARTR, a small neural circuit involved in the orientation-selection of swim bouts. We demonstrate that this visually-biased decision-making circuit can capture the statistics of both spontaneous and contrast-driven navigation. |
format | Online Article Text |
id | pubmed-6989119 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-69891192020-01-30 From behavior to circuit modeling of light-seeking navigation in zebrafish larvae Karpenko, Sophia Wolf, Sebastien Lafaye, Julie Le Goc, Guillaume Panier, Thomas Bormuth, Volker Candelier, Raphaël Debrégeas, Georges eLife Computational and Systems Biology Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation in zebrafish larvae. Using a virtual reality assay, we first characterize how motor and visual stimulation sequences govern the selection of discrete swim-bout events that subserve the fish navigation in the presence of a distant light source. These mechanisms are combined into a comprehensive Markov-chain model of navigation that quantitatively predicts the stationary distribution of the fish’s body orientation under any given illumination profile. We then map this behavioral description onto a neuronal model of the ARTR, a small neural circuit involved in the orientation-selection of swim bouts. We demonstrate that this visually-biased decision-making circuit can capture the statistics of both spontaneous and contrast-driven navigation. eLife Sciences Publications, Ltd 2020-01-02 /pmc/articles/PMC6989119/ /pubmed/31895038 http://dx.doi.org/10.7554/eLife.52882 Text en © 2020, Karpenko et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Computational and Systems Biology Karpenko, Sophia Wolf, Sebastien Lafaye, Julie Le Goc, Guillaume Panier, Thomas Bormuth, Volker Candelier, Raphaël Debrégeas, Georges From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title | From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title_full | From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title_fullStr | From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title_full_unstemmed | From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title_short | From behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
title_sort | from behavior to circuit modeling of light-seeking navigation in zebrafish larvae |
topic | Computational and Systems Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989119/ https://www.ncbi.nlm.nih.gov/pubmed/31895038 http://dx.doi.org/10.7554/eLife.52882 |
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