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From behavior to circuit modeling of light-seeking navigation in zebrafish larvae

Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation i...

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Autores principales: Karpenko, Sophia, Wolf, Sebastien, Lafaye, Julie, Le Goc, Guillaume, Panier, Thomas, Bormuth, Volker, Candelier, Raphaël, Debrégeas, Georges
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989119/
https://www.ncbi.nlm.nih.gov/pubmed/31895038
http://dx.doi.org/10.7554/eLife.52882
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author Karpenko, Sophia
Wolf, Sebastien
Lafaye, Julie
Le Goc, Guillaume
Panier, Thomas
Bormuth, Volker
Candelier, Raphaël
Debrégeas, Georges
author_facet Karpenko, Sophia
Wolf, Sebastien
Lafaye, Julie
Le Goc, Guillaume
Panier, Thomas
Bormuth, Volker
Candelier, Raphaël
Debrégeas, Georges
author_sort Karpenko, Sophia
collection PubMed
description Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation in zebrafish larvae. Using a virtual reality assay, we first characterize how motor and visual stimulation sequences govern the selection of discrete swim-bout events that subserve the fish navigation in the presence of a distant light source. These mechanisms are combined into a comprehensive Markov-chain model of navigation that quantitatively predicts the stationary distribution of the fish’s body orientation under any given illumination profile. We then map this behavioral description onto a neuronal model of the ARTR, a small neural circuit involved in the orientation-selection of swim bouts. We demonstrate that this visually-biased decision-making circuit can capture the statistics of both spontaneous and contrast-driven navigation.
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spelling pubmed-69891192020-01-30 From behavior to circuit modeling of light-seeking navigation in zebrafish larvae Karpenko, Sophia Wolf, Sebastien Lafaye, Julie Le Goc, Guillaume Panier, Thomas Bormuth, Volker Candelier, Raphaël Debrégeas, Georges eLife Computational and Systems Biology Bridging brain-scale circuit dynamics and organism-scale behavior is a central challenge in neuroscience. It requires the concurrent development of minimal behavioral and neural circuit models that can quantitatively capture basic sensorimotor operations. Here, we focus on light-seeking navigation in zebrafish larvae. Using a virtual reality assay, we first characterize how motor and visual stimulation sequences govern the selection of discrete swim-bout events that subserve the fish navigation in the presence of a distant light source. These mechanisms are combined into a comprehensive Markov-chain model of navigation that quantitatively predicts the stationary distribution of the fish’s body orientation under any given illumination profile. We then map this behavioral description onto a neuronal model of the ARTR, a small neural circuit involved in the orientation-selection of swim bouts. We demonstrate that this visually-biased decision-making circuit can capture the statistics of both spontaneous and contrast-driven navigation. eLife Sciences Publications, Ltd 2020-01-02 /pmc/articles/PMC6989119/ /pubmed/31895038 http://dx.doi.org/10.7554/eLife.52882 Text en © 2020, Karpenko et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Computational and Systems Biology
Karpenko, Sophia
Wolf, Sebastien
Lafaye, Julie
Le Goc, Guillaume
Panier, Thomas
Bormuth, Volker
Candelier, Raphaël
Debrégeas, Georges
From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title_full From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title_fullStr From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title_full_unstemmed From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title_short From behavior to circuit modeling of light-seeking navigation in zebrafish larvae
title_sort from behavior to circuit modeling of light-seeking navigation in zebrafish larvae
topic Computational and Systems Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989119/
https://www.ncbi.nlm.nih.gov/pubmed/31895038
http://dx.doi.org/10.7554/eLife.52882
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