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A Statistical Approach of Background Removal and Spectrum Identification for SERS Data
SERS (surface-enhanced Raman scattering) enhances the Raman signals, but the plasmonic effects are sensitive to the chemical environment and the coupling between nanoparticles, resulting in large and variable backgrounds, which make signal matching and analyte identification highly challenging. Remo...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989639/ https://www.ncbi.nlm.nih.gov/pubmed/31996718 http://dx.doi.org/10.1038/s41598-020-58061-z |
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author | Wang, Chuanqi Xiao, Lifu Dai, Chen Nguyen, Anh H. Littlepage, Laurie E. Schultz, Zachary D. Li, Jun |
author_facet | Wang, Chuanqi Xiao, Lifu Dai, Chen Nguyen, Anh H. Littlepage, Laurie E. Schultz, Zachary D. Li, Jun |
author_sort | Wang, Chuanqi |
collection | PubMed |
description | SERS (surface-enhanced Raman scattering) enhances the Raman signals, but the plasmonic effects are sensitive to the chemical environment and the coupling between nanoparticles, resulting in large and variable backgrounds, which make signal matching and analyte identification highly challenging. Removing background is essential, but existing methods either cannot fit the strong fluctuation of the SERS spectrum or do not consider the spectra’s shape change across time. Here we present a new statistical approach named SABARSI that overcomes these difficulties by combining information from multiple spectra. Further, after efficiently removing the background, we have developed the first automatic method, as a part of SABARSI, for detecting signals of molecules and matching signals corresponding to identical molecules. The superior efficiency and reproducibility of SABARSI are shown on two types of experimental datasets. |
format | Online Article Text |
id | pubmed-6989639 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69896392020-02-05 A Statistical Approach of Background Removal and Spectrum Identification for SERS Data Wang, Chuanqi Xiao, Lifu Dai, Chen Nguyen, Anh H. Littlepage, Laurie E. Schultz, Zachary D. Li, Jun Sci Rep Article SERS (surface-enhanced Raman scattering) enhances the Raman signals, but the plasmonic effects are sensitive to the chemical environment and the coupling between nanoparticles, resulting in large and variable backgrounds, which make signal matching and analyte identification highly challenging. Removing background is essential, but existing methods either cannot fit the strong fluctuation of the SERS spectrum or do not consider the spectra’s shape change across time. Here we present a new statistical approach named SABARSI that overcomes these difficulties by combining information from multiple spectra. Further, after efficiently removing the background, we have developed the first automatic method, as a part of SABARSI, for detecting signals of molecules and matching signals corresponding to identical molecules. The superior efficiency and reproducibility of SABARSI are shown on two types of experimental datasets. Nature Publishing Group UK 2020-01-29 /pmc/articles/PMC6989639/ /pubmed/31996718 http://dx.doi.org/10.1038/s41598-020-58061-z Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Wang, Chuanqi Xiao, Lifu Dai, Chen Nguyen, Anh H. Littlepage, Laurie E. Schultz, Zachary D. Li, Jun A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title | A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title_full | A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title_fullStr | A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title_full_unstemmed | A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title_short | A Statistical Approach of Background Removal and Spectrum Identification for SERS Data |
title_sort | statistical approach of background removal and spectrum identification for sers data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6989639/ https://www.ncbi.nlm.nih.gov/pubmed/31996718 http://dx.doi.org/10.1038/s41598-020-58061-z |
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