Cargando…

Conserved novel ORFs in the mitochondrial genome of the ctenophore Beroe forskalii

To date, five ctenophore species’ mitochondrial genomes have been sequenced, and each contains open reading frames (ORFs) that if translated have no identifiable orthologs. ORFs with no identifiable orthologs are called unidentified reading frames (URFs). If truly protein-coding, ctenophore mitochon...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schultz, Darrin T., Eizenga, Jordan M., Corbett-Detig, Russell B., Francis, Warren R., Christianson, Lynne M., Haddock, Steven H.D.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2020
Materias:	Bioinformatics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6991124/ https://www.ncbi.nlm.nih.gov/pubmed/32025367 http://dx.doi.org/10.7717/peerj.8356

Ejemplares similares

A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis
por: Schultz, Darrin T, et al.
Publicado: (2021)

Alternate patterns of doublet microtubule sliding in ATP-disintegrated macrocilia of the ctenophore Beroe
Publicado: (1984)

The complete mitochondrial genome of the Ctenophore Beroe cucumis, a mitochondrial genome showing rapid evolutionary rates
por: Wang, Minxiao, et al.
Publicado: (2019)

Non-excitable fluorescent protein orthologs found in ctenophores
por: Francis, Warren R., et al.
Publicado: (2016)

Speciation of pelagic zooplankton: Invisible boundaries can drive isolation of oceanic ctenophores
por: Johnson, Shannon B., et al.
Publicado: (2022)

Discovery, Prevalence, and Persistence of Novel Circular Single-Stranded DNA Viruses in the Ctenophores Mnemiopsis leidyi and Beroe ovata
por: Breitbart, Mya, et al.
Publicado: (2015)

Occurrence of Isopenicillin-N-Synthase Homologs in Bioluminescent Ctenophores and Implications for Coelenterazine Biosynthesis
por: Francis, Warren R., et al.
Publicado: (2015)

Records of ctenophores from South Africa
por: Gibbons, Mark J., et al.
Publicado: (2021)

Ancient gene linkages support ctenophores as sister to other animals
por: Schultz, Darrin T., et al.
Publicado: (2023)

Integrating Embryonic Development and Evolutionary History to Characterize Tentacle-Specific Cell Types in a Ctenophore
por: Babonis, Leslie S, et al.
Publicado: (2018)

NOTE ON THE EXCITATION AND INHIBITION OF LUMINESCENCE IN BERŒ
por: Heymans, C., et al.
Publicado: (1925)

Novel pipeline identifies new upstream ORFs and non-AUG initiating main ORFs with conserved amino acid sequences in the 5′ leader of mRNAs in Arabidopsis thaliana
por: van der Horst, Sjors, et al.
Publicado: (2019)

Evidence for de novo Biosynthesis of the Luminous Substrate Coelenterazine in Ctenophores
por: Bessho-Uehara, Manabu, et al.
Publicado: (2020)

Symplectin evolved from multiple duplications in bioluminescent squid
por: Francis, Warren R., et al.
Publicado: (2017)

Identification of Bulinus forskalii as a potential intermediate host of Schistosoma hæmatobium in Senegal
por: Gaye, Papa Mouhamadou, et al.
Publicado: (2023)

Hidden diversity of Ctenophora revealed by new mitochondrial COI primers and sequences
por: Christianson, Lynne M., et al.
Publicado: (2021)

A comparative bioinformatic analysis of C9orf72
por: Iyer, Shalini, et al.
Publicado: (2018)

Giant smooth muscle cells of Beroe. Ultrastructure, innervation, and electrical properties
Publicado: (1980)

An issue of concern: unique truncated ORF8 protein variants of SARS-CoV-2
por: Hassan, Sk. Sarif, et al.
Publicado: (2022)

Phosphoproteomic insights into processes influenced by the kinase-like protein DIA1/C3orf58
por: Hareza, Agnieszka, et al.
Publicado: (2018)

Genome-wide analysis of circular RNAs in goat skin fibroblast cells in response to Orf virus infection
por: Pang, Feng, et al.
Publicado: (2019)

Depth- and temperature-specific fatty acid adaptations in ctenophores from extreme habitats
por: Winnikoff, Jacob R., et al.
Publicado: (2021)

Nitric oxide signaling in ctenophores
por: Moroz, Leonid L., et al.
Publicado: (2023)

IRBIS: a systematic search for conserved complementarity
por: Pervouchine, Dmitri D.
Publicado: (2014)

Very few sites can reshape the inferred phylogenetic tree
por: Francis, Warren R., et al.
Publicado: (2020)

Splicing conservation signals in plant long noncoding RNAs
por: Corona-Gomez, Jose Antonio, et al.
Publicado: (2020)

Comparative genomics in the search for conserved long noncoding RNAs
por: Szcześniak, Michał Wojciech, et al.
Publicado: (2021)

The universally conserved nucleotides of the small subunit ribosomal RNAs
por: Noller, Harry F., et al.
Publicado: (2022)

The first complete plastid genomes of Melastomataceae are highly structurally conserved
por: Reginato, Marcelo, et al.
Publicado: (2016)

BACPHLIP: predicting bacteriophage lifestyle from conserved protein domains
por: Hockenberry, Adam J., et al.
Publicado: (2021)

Genomic organization, evolution, and expression of photoprotein and opsin genes in Mnemiopsis leidyi: a new view of ctenophore photocytes
por: Schnitzler, Christine E, et al.
Publicado: (2012)

Diverse modes of evolutionary emergence and flux of conserved microRNA clusters
por: Mohammed, Jaaved, et al.
Publicado: (2014)

Comparison of splice sites reveals that long noncoding RNAs are evolutionarily well conserved
por: Nitsche, Anne, et al.
Publicado: (2015)

Conserved RNA secondary structures and long-range interactions in hepatitis C viruses
por: Fricke, Markus, et al.
Publicado: (2015)

Characterization of gene promoters in pig: conservative elements, regulatory motifs and evolutionary trend
por: Wei, Kai, et al.
Publicado: (2019)

Long-range RNA structures in the human transcriptome beyond evolutionarily conserved regions
por: Margasyuk, Sergey, et al.
Publicado: (2023)

Molecular diversity of benthic ctenophores (Coeloplanidae)
por: Alamaru, Ada, et al.
Publicado: (2017)

Syncmers are more sensitive than minimizers for selecting conserved k‑mers in biological sequences
por: Edgar, Robert
Publicado: (2021)

Population structure of wild soybean (Glycine soja) based on SLAF-seq have implications for its conservation
por: Meng, Jing, et al.
Publicado: (2023)

cRegions—a tool for detecting conserved cis-elements in multiple sequence alignment of diverged coding sequences
por: Puustusmaa, Mikk, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_1muvdh01q4bg2nbenh3pru4p4t