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Electrostatically PEGylated DNA enables salt-free hybridization in water

Chemically modified nucleic acids have long served as a very important class of bio-hybrid structures. In particular, the modification with PEG has advanced the scope and performance of oligonucleotides in materials science, catalysis and therapeutics. Most of the applications involving pristine or...

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Autores principales: Chakraborty, Gurudas, Balinin, Konstantin, Portale, Giuseppe, Loznik, Mark, Polushkin, Evgeny, Weil, Tanja, Herrmann, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6991176/
https://www.ncbi.nlm.nih.gov/pubmed/32055364
http://dx.doi.org/10.1039/c9sc02598g
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author Chakraborty, Gurudas
Balinin, Konstantin
Portale, Giuseppe
Loznik, Mark
Polushkin, Evgeny
Weil, Tanja
Herrmann, Andreas
author_facet Chakraborty, Gurudas
Balinin, Konstantin
Portale, Giuseppe
Loznik, Mark
Polushkin, Evgeny
Weil, Tanja
Herrmann, Andreas
author_sort Chakraborty, Gurudas
collection PubMed
description Chemically modified nucleic acids have long served as a very important class of bio-hybrid structures. In particular, the modification with PEG has advanced the scope and performance of oligonucleotides in materials science, catalysis and therapeutics. Most of the applications involving pristine or modified DNA rely on the potential of DNA to form a double-stranded structure. However, a substantial requirement for metal-cations to achieve hybridization has restricted the range of applications. To extend the applicability of DNA in salt-free or low ionic strength aqueous medium, we introduce noncovalent DNA–PEG constructs that allow canonical base-pairing between individually PEGylated complementary strands resulting in a double-stranded structure in salt-free aqueous medium. This method relies on grafting of amino-terminated PEG polymers electrostatically onto the backbone of DNA, which results in the formation of a PEG-envelope. The specific charge interaction of PEG molecules with DNA, absolute absence of metal ions within the PEGylated DNA molecules and formation of a double helix that is significantly more stable than the duplex in an ionic buffer have been unequivocally demonstrated using multiple independent characterization techniques.
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spelling pubmed-69911762020-02-13 Electrostatically PEGylated DNA enables salt-free hybridization in water Chakraborty, Gurudas Balinin, Konstantin Portale, Giuseppe Loznik, Mark Polushkin, Evgeny Weil, Tanja Herrmann, Andreas Chem Sci Chemistry Chemically modified nucleic acids have long served as a very important class of bio-hybrid structures. In particular, the modification with PEG has advanced the scope and performance of oligonucleotides in materials science, catalysis and therapeutics. Most of the applications involving pristine or modified DNA rely on the potential of DNA to form a double-stranded structure. However, a substantial requirement for metal-cations to achieve hybridization has restricted the range of applications. To extend the applicability of DNA in salt-free or low ionic strength aqueous medium, we introduce noncovalent DNA–PEG constructs that allow canonical base-pairing between individually PEGylated complementary strands resulting in a double-stranded structure in salt-free aqueous medium. This method relies on grafting of amino-terminated PEG polymers electrostatically onto the backbone of DNA, which results in the formation of a PEG-envelope. The specific charge interaction of PEG molecules with DNA, absolute absence of metal ions within the PEGylated DNA molecules and formation of a double helix that is significantly more stable than the duplex in an ionic buffer have been unequivocally demonstrated using multiple independent characterization techniques. Royal Society of Chemistry 2019-09-12 /pmc/articles/PMC6991176/ /pubmed/32055364 http://dx.doi.org/10.1039/c9sc02598g Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0)
spellingShingle Chemistry
Chakraborty, Gurudas
Balinin, Konstantin
Portale, Giuseppe
Loznik, Mark
Polushkin, Evgeny
Weil, Tanja
Herrmann, Andreas
Electrostatically PEGylated DNA enables salt-free hybridization in water
title Electrostatically PEGylated DNA enables salt-free hybridization in water
title_full Electrostatically PEGylated DNA enables salt-free hybridization in water
title_fullStr Electrostatically PEGylated DNA enables salt-free hybridization in water
title_full_unstemmed Electrostatically PEGylated DNA enables salt-free hybridization in water
title_short Electrostatically PEGylated DNA enables salt-free hybridization in water
title_sort electrostatically pegylated dna enables salt-free hybridization in water
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6991176/
https://www.ncbi.nlm.nih.gov/pubmed/32055364
http://dx.doi.org/10.1039/c9sc02598g
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