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Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours
Histopathological classification of gastric and colonic epithelial tumours is one of the routine pathological diagnosis tasks for pathologists. Computational pathology techniques based on Artificial intelligence (AI) would be of high benefit in easing the ever increasing workloads on pathologists, e...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992793/ https://www.ncbi.nlm.nih.gov/pubmed/32001752 http://dx.doi.org/10.1038/s41598-020-58467-9 |
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author | Iizuka, Osamu Kanavati, Fahdi Kato, Kei Rambeau, Michael Arihiro, Koji Tsuneki, Masayuki |
author_facet | Iizuka, Osamu Kanavati, Fahdi Kato, Kei Rambeau, Michael Arihiro, Koji Tsuneki, Masayuki |
author_sort | Iizuka, Osamu |
collection | PubMed |
description | Histopathological classification of gastric and colonic epithelial tumours is one of the routine pathological diagnosis tasks for pathologists. Computational pathology techniques based on Artificial intelligence (AI) would be of high benefit in easing the ever increasing workloads on pathologists, especially in regions that have shortages in access to pathological diagnosis services. In this study, we trained convolutional neural networks (CNNs) and recurrent neural networks (RNNs) on biopsy histopathology whole-slide images (WSIs) of stomach and colon. The models were trained to classify WSI into adenocarcinoma, adenoma, and non-neoplastic. We evaluated our models on three independent test sets each, achieving area under the curves (AUCs) up to 0.97 and 0.99 for gastric adenocarcinoma and adenoma, respectively, and 0.96 and 0.99 for colonic adenocarcinoma and adenoma respectively. The results demonstrate the generalisation ability of our models and the high promising potential of deployment in a practical histopathological diagnostic workflow system. |
format | Online Article Text |
id | pubmed-6992793 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69927932020-02-05 Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours Iizuka, Osamu Kanavati, Fahdi Kato, Kei Rambeau, Michael Arihiro, Koji Tsuneki, Masayuki Sci Rep Article Histopathological classification of gastric and colonic epithelial tumours is one of the routine pathological diagnosis tasks for pathologists. Computational pathology techniques based on Artificial intelligence (AI) would be of high benefit in easing the ever increasing workloads on pathologists, especially in regions that have shortages in access to pathological diagnosis services. In this study, we trained convolutional neural networks (CNNs) and recurrent neural networks (RNNs) on biopsy histopathology whole-slide images (WSIs) of stomach and colon. The models were trained to classify WSI into adenocarcinoma, adenoma, and non-neoplastic. We evaluated our models on three independent test sets each, achieving area under the curves (AUCs) up to 0.97 and 0.99 for gastric adenocarcinoma and adenoma, respectively, and 0.96 and 0.99 for colonic adenocarcinoma and adenoma respectively. The results demonstrate the generalisation ability of our models and the high promising potential of deployment in a practical histopathological diagnostic workflow system. Nature Publishing Group UK 2020-01-30 /pmc/articles/PMC6992793/ /pubmed/32001752 http://dx.doi.org/10.1038/s41598-020-58467-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Iizuka, Osamu Kanavati, Fahdi Kato, Kei Rambeau, Michael Arihiro, Koji Tsuneki, Masayuki Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title | Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title_full | Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title_fullStr | Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title_full_unstemmed | Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title_short | Deep Learning Models for Histopathological Classification of Gastric and Colonic Epithelial Tumours |
title_sort | deep learning models for histopathological classification of gastric and colonic epithelial tumours |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992793/ https://www.ncbi.nlm.nih.gov/pubmed/32001752 http://dx.doi.org/10.1038/s41598-020-58467-9 |
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