Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria

In 2018, a 26-month-old girl, fully vaccinated with Rotarix in 2016, presented with fever, diarrhea, and vomiting. A rapid test showed that her feces contained rotavirus A (RVA). VP7 reverse transcription-PCR (RT-PCR) and Illumina sequencing showed that a G1P[8] strain with a Wa-like genotype conste...

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Autores principales: Faleye, T. O. C., George, U. E., Simsek, C., Arowolo, O. A., Adewumi, O. M., Matthijnssens, J., Adeniji, J. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992866/
https://www.ncbi.nlm.nih.gov/pubmed/32001562
http://dx.doi.org/10.1128/MRA.01352-19
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author Faleye, T. O. C.
George, U. E.
Simsek, C.
Arowolo, O. A.
Adewumi, O. M.
Matthijnssens, J.
Adeniji, J. A.
author_facet Faleye, T. O. C.
George, U. E.
Simsek, C.
Arowolo, O. A.
Adewumi, O. M.
Matthijnssens, J.
Adeniji, J. A.
author_sort Faleye, T. O. C.
collection PubMed
description In 2018, a 26-month-old girl, fully vaccinated with Rotarix in 2016, presented with fever, diarrhea, and vomiting. A rapid test showed that her feces contained rotavirus A (RVA). VP7 reverse transcription-PCR (RT-PCR) and Illumina sequencing showed that a G1P[8] strain with a Wa-like genotype constellation was the etiologic agent. This is the first near-complete RVA genome sequence from Nigeria.
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spelling pubmed-69928662020-02-11 Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria Faleye, T. O. C. George, U. E. Simsek, C. Arowolo, O. A. Adewumi, O. M. Matthijnssens, J. Adeniji, J. A. Microbiol Resour Announc Genome Sequences In 2018, a 26-month-old girl, fully vaccinated with Rotarix in 2016, presented with fever, diarrhea, and vomiting. A rapid test showed that her feces contained rotavirus A (RVA). VP7 reverse transcription-PCR (RT-PCR) and Illumina sequencing showed that a G1P[8] strain with a Wa-like genotype constellation was the etiologic agent. This is the first near-complete RVA genome sequence from Nigeria. American Society for Microbiology 2020-01-30 /pmc/articles/PMC6992866/ /pubmed/32001562 http://dx.doi.org/10.1128/MRA.01352-19 Text en Copyright © 2020 Faleye et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Faleye, T. O. C.
George, U. E.
Simsek, C.
Arowolo, O. A.
Adewumi, O. M.
Matthijnssens, J.
Adeniji, J. A.
Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title_full Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title_fullStr Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title_full_unstemmed Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title_short Reference Human Rotavirus A Genome Sequence from a Previously Vaccinated Child with Diarrhea in Nigeria
title_sort reference human rotavirus a genome sequence from a previously vaccinated child with diarrhea in nigeria
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992866/
https://www.ncbi.nlm.nih.gov/pubmed/32001562
http://dx.doi.org/10.1128/MRA.01352-19
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