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Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator

Britton Chance, electronics expert when a teenager, became an enthusiastic student of biological oscillations, passing on this enthusiasm to many students and colleagues, including one of us (DL). This historical essay traces BC’s influence through the accumulated work of DL to DL’s many collaborato...

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Autores principales: Lloyd, David, Murray, Douglas B., Aon, Miguel A., Cortassa, Sonia, Roussel, Marc R., Beckmann, Manfred, Poole, Robert K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992908/
https://www.ncbi.nlm.nih.gov/pubmed/30516036
http://dx.doi.org/10.1117/1.JBO.24.5.051404
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author Lloyd, David
Murray, Douglas B.
Aon, Miguel A.
Cortassa, Sonia
Roussel, Marc R.
Beckmann, Manfred
Poole, Robert K.
author_facet Lloyd, David
Murray, Douglas B.
Aon, Miguel A.
Cortassa, Sonia
Roussel, Marc R.
Beckmann, Manfred
Poole, Robert K.
author_sort Lloyd, David
collection PubMed
description Britton Chance, electronics expert when a teenager, became an enthusiastic student of biological oscillations, passing on this enthusiasm to many students and colleagues, including one of us (DL). This historical essay traces BC’s influence through the accumulated work of DL to DL’s many collaborators. The overall temporal organization of mass-energy, information, and signaling networks in yeast in self-synchronized continuous cultures represents, until now, the most characterized example of in vivo elucidation of time structure. Continuous online monitoring of dissolved gases by direct measurement (membrane-inlet mass spectrometry, together with NAD(P)H and flavin fluorescence) gives strain-specific dynamic information from timescales of minutes to hours as does two-photon imaging. The predominantly oscillatory behavior of network components becomes evident, with spontaneously synchronized cellular respiration cycles between discrete periods of increased oxygen consumption (oxidative phase) and decreased oxygen consumption (reductive phase). This temperature-compensated ultradian clock provides coordination, linking temporally partitioned functions by direct feedback loops between the energetic and redox state of the cell and its growing ultrastructure. Multioscillatory outputs in dissolved gases with 13 h, 40 min, and 4 min periods gave statistical self-similarity in power spectral and relative dispersional analyses: i.e., complex nonlinear (chaotic) behavior and a functional scale-free (fractal) network operating simultaneously over several timescales.
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spelling pubmed-69929082020-02-10 Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator Lloyd, David Murray, Douglas B. Aon, Miguel A. Cortassa, Sonia Roussel, Marc R. Beckmann, Manfred Poole, Robert K. J Biomed Opt Special Section on Metabolic Imaging and Spectroscopy: Britton Chance 105th Birthday Commemorative Britton Chance, electronics expert when a teenager, became an enthusiastic student of biological oscillations, passing on this enthusiasm to many students and colleagues, including one of us (DL). This historical essay traces BC’s influence through the accumulated work of DL to DL’s many collaborators. The overall temporal organization of mass-energy, information, and signaling networks in yeast in self-synchronized continuous cultures represents, until now, the most characterized example of in vivo elucidation of time structure. Continuous online monitoring of dissolved gases by direct measurement (membrane-inlet mass spectrometry, together with NAD(P)H and flavin fluorescence) gives strain-specific dynamic information from timescales of minutes to hours as does two-photon imaging. The predominantly oscillatory behavior of network components becomes evident, with spontaneously synchronized cellular respiration cycles between discrete periods of increased oxygen consumption (oxidative phase) and decreased oxygen consumption (reductive phase). This temperature-compensated ultradian clock provides coordination, linking temporally partitioned functions by direct feedback loops between the energetic and redox state of the cell and its growing ultrastructure. Multioscillatory outputs in dissolved gases with 13 h, 40 min, and 4 min periods gave statistical self-similarity in power spectral and relative dispersional analyses: i.e., complex nonlinear (chaotic) behavior and a functional scale-free (fractal) network operating simultaneously over several timescales. Society of Photo-Optical Instrumentation Engineers 2018-12-04 2019-05 /pmc/articles/PMC6992908/ /pubmed/30516036 http://dx.doi.org/10.1117/1.JBO.24.5.051404 Text en © The Authors. https://creativecommons.org/licenses/by/3.0/ Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Special Section on Metabolic Imaging and Spectroscopy: Britton Chance 105th Birthday Commemorative
Lloyd, David
Murray, Douglas B.
Aon, Miguel A.
Cortassa, Sonia
Roussel, Marc R.
Beckmann, Manfred
Poole, Robert K.
Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title_full Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title_fullStr Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title_full_unstemmed Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title_short Temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
title_sort temporal metabolic partitioning of the yeast and protist cellular networks: the cell is a global scale-invariant (fractal or self-similar) multioscillator
topic Special Section on Metabolic Imaging and Spectroscopy: Britton Chance 105th Birthday Commemorative
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992908/
https://www.ncbi.nlm.nih.gov/pubmed/30516036
http://dx.doi.org/10.1117/1.JBO.24.5.051404
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