Cargando…
Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity
The aims of this study were to evaluate the intra- and interobserver reproducibility of manual segmentation of bone sarcomas in magnetic resonance imaging (MRI) studies and to compare manual and semiautomatic segmentation methods. This retrospective study included twelve osteosarcoma and eight Ewing...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Associação Brasileira de Divulgação Científica
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6993358/ https://www.ncbi.nlm.nih.gov/pubmed/32022102 http://dx.doi.org/10.1590/1414-431X20198962 |
_version_ | 1783493015218683904 |
---|---|
author | Dionísio, F.C.F. Oliveira, L.S. Hernandes, M.A. Engel, E.E. Rangayyan, R.M. Azevedo-Marques, P.M. Nogueira-Barbosa, M.H. |
author_facet | Dionísio, F.C.F. Oliveira, L.S. Hernandes, M.A. Engel, E.E. Rangayyan, R.M. Azevedo-Marques, P.M. Nogueira-Barbosa, M.H. |
author_sort | Dionísio, F.C.F. |
collection | PubMed |
description | The aims of this study were to evaluate the intra- and interobserver reproducibility of manual segmentation of bone sarcomas in magnetic resonance imaging (MRI) studies and to compare manual and semiautomatic segmentation methods. This retrospective study included twelve osteosarcoma and eight Ewing sarcoma MRI studies performed prior to any therapeutic intervention. All cases were histopathologically confirmed. Three radiologists used 3D-Slicer software to perform manual segmentation of bone sarcomas in a blinded and independent manner. One radiologist segmented manually and also performed semiautomatic segmentation with the GrowCut tool. Segmentation exercises were timed for comparison. The dice similarity coefficient (DSC) and Hausdorff distance (HD) were used to evaluate similarity between the segmentation results and further statistical analyses were performed to compare DSC, HD, and volumetric results. Manual segmentation was reproducible with intraobserver DSC varying from 0.83 to 0.97 and HD from 3.37 to 28.73 mm. Interobserver DSC of manual segmentation showed variation from 0.73 to 0.97 and HD from 3.93 to 33.40 mm. Semiautomatic segmentation compared to manual segmentation resulted in DSCs of 0.71−0.96 and HDs of 5.38−31.54 mm. Semiautomatic segmentation required significantly less time compared to manual segmentation (P value ≤0.05). Among all situations compared, tumor volumetry did not show significant statistical differences (P value >0.05). We found excellent intra- and interobserver agreement for manual segmentation of osteosarcoma and Ewing sarcoma. There was high similarity between manual and semiautomatic segmentation, with a significant reduction of segmentation time using the semiautomatic method. |
format | Online Article Text |
id | pubmed-6993358 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Associação Brasileira de Divulgação Científica |
record_format | MEDLINE/PubMed |
spelling | pubmed-69933582020-02-14 Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity Dionísio, F.C.F. Oliveira, L.S. Hernandes, M.A. Engel, E.E. Rangayyan, R.M. Azevedo-Marques, P.M. Nogueira-Barbosa, M.H. Braz J Med Biol Res Research Article The aims of this study were to evaluate the intra- and interobserver reproducibility of manual segmentation of bone sarcomas in magnetic resonance imaging (MRI) studies and to compare manual and semiautomatic segmentation methods. This retrospective study included twelve osteosarcoma and eight Ewing sarcoma MRI studies performed prior to any therapeutic intervention. All cases were histopathologically confirmed. Three radiologists used 3D-Slicer software to perform manual segmentation of bone sarcomas in a blinded and independent manner. One radiologist segmented manually and also performed semiautomatic segmentation with the GrowCut tool. Segmentation exercises were timed for comparison. The dice similarity coefficient (DSC) and Hausdorff distance (HD) were used to evaluate similarity between the segmentation results and further statistical analyses were performed to compare DSC, HD, and volumetric results. Manual segmentation was reproducible with intraobserver DSC varying from 0.83 to 0.97 and HD from 3.37 to 28.73 mm. Interobserver DSC of manual segmentation showed variation from 0.73 to 0.97 and HD from 3.93 to 33.40 mm. Semiautomatic segmentation compared to manual segmentation resulted in DSCs of 0.71−0.96 and HDs of 5.38−31.54 mm. Semiautomatic segmentation required significantly less time compared to manual segmentation (P value ≤0.05). Among all situations compared, tumor volumetry did not show significant statistical differences (P value >0.05). We found excellent intra- and interobserver agreement for manual segmentation of osteosarcoma and Ewing sarcoma. There was high similarity between manual and semiautomatic segmentation, with a significant reduction of segmentation time using the semiautomatic method. Associação Brasileira de Divulgação Científica 2020-01-31 /pmc/articles/PMC6993358/ /pubmed/32022102 http://dx.doi.org/10.1590/1414-431X20198962 Text en https://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Dionísio, F.C.F. Oliveira, L.S. Hernandes, M.A. Engel, E.E. Rangayyan, R.M. Azevedo-Marques, P.M. Nogueira-Barbosa, M.H. Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title | Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title_full | Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title_fullStr | Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title_full_unstemmed | Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title_short | Manual and semiautomatic segmentation of bone sarcomas on MRI have high similarity |
title_sort | manual and semiautomatic segmentation of bone sarcomas on mri have high similarity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6993358/ https://www.ncbi.nlm.nih.gov/pubmed/32022102 http://dx.doi.org/10.1590/1414-431X20198962 |
work_keys_str_mv | AT dionisiofcf manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT oliveirals manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT hernandesma manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT engelee manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT rangayyanrm manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT azevedomarquespm manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity AT nogueirabarbosamh manualandsemiautomaticsegmentationofbonesarcomasonmrihavehighsimilarity |