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Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs
The 3’-most genes in RNA-2 of the Crinivirus genus members (family Closteroviridae) code for non-structural p26 proteins that share amino acid sequence similarity [Stewart LR, Hwang MS, Falk BW (2009) Virus Res 145:293-299]. In this study, sensitive bioinformatic tools have been used to identify the...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6994434/ https://www.ncbi.nlm.nih.gov/pubmed/31828509 http://dx.doi.org/10.1007/s00705-019-04491-8 |
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author | Rogozin, I. B. Agranovsky, A. A. |
author_facet | Rogozin, I. B. Agranovsky, A. A. |
author_sort | Rogozin, I. B. |
collection | PubMed |
description | The 3’-most genes in RNA-2 of the Crinivirus genus members (family Closteroviridae) code for non-structural p26 proteins that share amino acid sequence similarity [Stewart LR, Hwang MS, Falk BW (2009) Virus Res 145:293-299]. In this study, sensitive bioinformatic tools have been used to identify the homologous p26 proteins encoded by the 3’ genes in monopartite genomes of the members of Velarivirus, another Closteroviridae genus, and mint vein banding-associated virus, an unassigned member of the family. The p26 proteins showed similarity in their predicted secondary structures, but an amino acid sequence alignment showed no strictly conserved positions, thus indicating a high plasticity of these non-structural proteins. The implications of the sequence analysis for possible functions of the crinivirus and velarivirus p26 proteins are discussed. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00705-019-04491-8) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6994434 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-69944342020-02-14 Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs Rogozin, I. B. Agranovsky, A. A. Arch Virol Brief Report The 3’-most genes in RNA-2 of the Crinivirus genus members (family Closteroviridae) code for non-structural p26 proteins that share amino acid sequence similarity [Stewart LR, Hwang MS, Falk BW (2009) Virus Res 145:293-299]. In this study, sensitive bioinformatic tools have been used to identify the homologous p26 proteins encoded by the 3’ genes in monopartite genomes of the members of Velarivirus, another Closteroviridae genus, and mint vein banding-associated virus, an unassigned member of the family. The p26 proteins showed similarity in their predicted secondary structures, but an amino acid sequence alignment showed no strictly conserved positions, thus indicating a high plasticity of these non-structural proteins. The implications of the sequence analysis for possible functions of the crinivirus and velarivirus p26 proteins are discussed. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00705-019-04491-8) contains supplementary material, which is available to authorized users. Springer Vienna 2019-12-11 2020 /pmc/articles/PMC6994434/ /pubmed/31828509 http://dx.doi.org/10.1007/s00705-019-04491-8 Text en © The Author(s) 2019 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Brief Report Rogozin, I. B. Agranovsky, A. A. Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title | Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title_full | Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title_fullStr | Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title_full_unstemmed | Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title_short | Nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
title_sort | nonstructural p26 proteins encoded by the 3’-proximal genes of velariviruses and criniviruses are orthologs |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6994434/ https://www.ncbi.nlm.nih.gov/pubmed/31828509 http://dx.doi.org/10.1007/s00705-019-04491-8 |
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