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The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death
Cell viability and cytotoxicity assays are highly important for drug screening and cytotoxicity tests of antineoplastic or other therapeutic drugs. Even though biochemical-based tests are very helpful to obtain preliminary preview, their results should be confirmed by methods based on direct cell de...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6994697/ https://www.ncbi.nlm.nih.gov/pubmed/32005874 http://dx.doi.org/10.1038/s41598-020-58474-w |
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author | Vicar, Tomas Raudenska, Martina Gumulec, Jaromir Balvan, Jan |
author_facet | Vicar, Tomas Raudenska, Martina Gumulec, Jaromir Balvan, Jan |
author_sort | Vicar, Tomas |
collection | PubMed |
description | Cell viability and cytotoxicity assays are highly important for drug screening and cytotoxicity tests of antineoplastic or other therapeutic drugs. Even though biochemical-based tests are very helpful to obtain preliminary preview, their results should be confirmed by methods based on direct cell death assessment. In this study, time-dependent changes in quantitative phase-based parameters during cell death were determined and methodology useable for rapid and label-free assessment of direct cell death was introduced. The goal of our study was distinction between apoptosis and primary lytic cell death based on morphologic features. We have distinguished the lytic and non-lytic type of cell death according to their end-point features (Dance of Death typical for apoptosis versus swelling and membrane rupture typical for all kinds of necrosis common for necroptosis, pyroptosis, ferroptosis and accidental cell death). Our method utilizes Quantitative Phase Imaging (QPI) which enables the time-lapse observation of subtle changes in cell mass distribution. According to our results, morphological and dynamical features extracted from QPI micrographs are suitable for cell death detection (76% accuracy in comparison with manual annotation). Furthermore, based on QPI data alone and machine learning, we were able to classify typical dynamical changes of cell morphology during both caspase 3,7-dependent and -independent cell death subroutines. The main parameters used for label-free detection of these cell death modalities were cell density (pg/pixel) and average intensity change of cell pixels further designated as Cell Dynamic Score (CDS). To the best of our knowledge, this is the first study introducing CDS and cell density as a parameter typical for individual cell death subroutines with prediction accuracy 75.4% for caspase 3,7-dependent and -independent cell death. |
format | Online Article Text |
id | pubmed-6994697 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-69946972020-02-06 The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death Vicar, Tomas Raudenska, Martina Gumulec, Jaromir Balvan, Jan Sci Rep Article Cell viability and cytotoxicity assays are highly important for drug screening and cytotoxicity tests of antineoplastic or other therapeutic drugs. Even though biochemical-based tests are very helpful to obtain preliminary preview, their results should be confirmed by methods based on direct cell death assessment. In this study, time-dependent changes in quantitative phase-based parameters during cell death were determined and methodology useable for rapid and label-free assessment of direct cell death was introduced. The goal of our study was distinction between apoptosis and primary lytic cell death based on morphologic features. We have distinguished the lytic and non-lytic type of cell death according to their end-point features (Dance of Death typical for apoptosis versus swelling and membrane rupture typical for all kinds of necrosis common for necroptosis, pyroptosis, ferroptosis and accidental cell death). Our method utilizes Quantitative Phase Imaging (QPI) which enables the time-lapse observation of subtle changes in cell mass distribution. According to our results, morphological and dynamical features extracted from QPI micrographs are suitable for cell death detection (76% accuracy in comparison with manual annotation). Furthermore, based on QPI data alone and machine learning, we were able to classify typical dynamical changes of cell morphology during both caspase 3,7-dependent and -independent cell death subroutines. The main parameters used for label-free detection of these cell death modalities were cell density (pg/pixel) and average intensity change of cell pixels further designated as Cell Dynamic Score (CDS). To the best of our knowledge, this is the first study introducing CDS and cell density as a parameter typical for individual cell death subroutines with prediction accuracy 75.4% for caspase 3,7-dependent and -independent cell death. Nature Publishing Group UK 2020-01-31 /pmc/articles/PMC6994697/ /pubmed/32005874 http://dx.doi.org/10.1038/s41598-020-58474-w Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Vicar, Tomas Raudenska, Martina Gumulec, Jaromir Balvan, Jan The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title | The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title_full | The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title_fullStr | The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title_full_unstemmed | The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title_short | The Quantitative-Phase Dynamics of Apoptosis and Lytic Cell Death |
title_sort | quantitative-phase dynamics of apoptosis and lytic cell death |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6994697/ https://www.ncbi.nlm.nih.gov/pubmed/32005874 http://dx.doi.org/10.1038/s41598-020-58474-w |
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