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Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli
OBJECTIVE: Extraintestinal Pathogenic E. coli (ExPEC), are responsible for host diseases such as Neonatal Meningitis Escherichia coli (NMEC), the second-leading cause of neonatal bacterial meningitis, Avian Pathogenic E. coli (APEC), a cause of extraintestinal disease in poultry, and Uropathogenic E...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6995065/ https://www.ncbi.nlm.nih.gov/pubmed/32005127 http://dx.doi.org/10.1186/s13104-020-4917-5 |
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author | Nielsen, Daniel W. Ricker, Nicole Barbieri, Nicolle L. Allen, Heather K. Nolan, Lisa K. Logue, Catherine M. |
author_facet | Nielsen, Daniel W. Ricker, Nicole Barbieri, Nicolle L. Allen, Heather K. Nolan, Lisa K. Logue, Catherine M. |
author_sort | Nielsen, Daniel W. |
collection | PubMed |
description | OBJECTIVE: Extraintestinal Pathogenic E. coli (ExPEC), are responsible for host diseases such as Neonatal Meningitis Escherichia coli (NMEC), the second-leading cause of neonatal bacterial meningitis, Avian Pathogenic E. coli (APEC), a cause of extraintestinal disease in poultry, and Uropathogenic E. coli (UPEC), the most common cause of urinary tract infections. Virulence factors associated with NMEC include outer membrane protein A (OmpA) and type I fimbriae (FimH), which also occur in APEC and UPEC. OmpA contributes to NMEC’s ability to cross the blood–brain barrier, persist in the bloodstream and has been identified as a potential vaccine target for ExPEC, however the protein has amino acid variants, which may influence virulence of strains or alter vaccine efficacy. Although OmpA is present in virtually all E. coli, differences in its amino acid residues have yet to be surveyed in ExPEC. RESULTS: Here the ompA gene (n = 399) from ExPEC collections were sequenced and translated in silico. Twenty-five different OmpA polymorphism patterns were identified. Seven polymorphism patterns were significantly associated with an ExPEC subpathotype, but chromosomal history most likely accounts for most differences found. The differences in OmpA protein sequences suggest that OmpA may influence variation in virulence and host specificity within ExPEC subpathotypes. |
format | Online Article Text |
id | pubmed-6995065 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-69950652020-02-04 Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli Nielsen, Daniel W. Ricker, Nicole Barbieri, Nicolle L. Allen, Heather K. Nolan, Lisa K. Logue, Catherine M. BMC Res Notes Research Note OBJECTIVE: Extraintestinal Pathogenic E. coli (ExPEC), are responsible for host diseases such as Neonatal Meningitis Escherichia coli (NMEC), the second-leading cause of neonatal bacterial meningitis, Avian Pathogenic E. coli (APEC), a cause of extraintestinal disease in poultry, and Uropathogenic E. coli (UPEC), the most common cause of urinary tract infections. Virulence factors associated with NMEC include outer membrane protein A (OmpA) and type I fimbriae (FimH), which also occur in APEC and UPEC. OmpA contributes to NMEC’s ability to cross the blood–brain barrier, persist in the bloodstream and has been identified as a potential vaccine target for ExPEC, however the protein has amino acid variants, which may influence virulence of strains or alter vaccine efficacy. Although OmpA is present in virtually all E. coli, differences in its amino acid residues have yet to be surveyed in ExPEC. RESULTS: Here the ompA gene (n = 399) from ExPEC collections were sequenced and translated in silico. Twenty-five different OmpA polymorphism patterns were identified. Seven polymorphism patterns were significantly associated with an ExPEC subpathotype, but chromosomal history most likely accounts for most differences found. The differences in OmpA protein sequences suggest that OmpA may influence variation in virulence and host specificity within ExPEC subpathotypes. BioMed Central 2020-01-31 /pmc/articles/PMC6995065/ /pubmed/32005127 http://dx.doi.org/10.1186/s13104-020-4917-5 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Note Nielsen, Daniel W. Ricker, Nicole Barbieri, Nicolle L. Allen, Heather K. Nolan, Lisa K. Logue, Catherine M. Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title | Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title_full | Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title_fullStr | Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title_full_unstemmed | Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title_short | Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli |
title_sort | outer membrane protein a (ompa) of extraintestinal pathogenic escherichia coli |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6995065/ https://www.ncbi.nlm.nih.gov/pubmed/32005127 http://dx.doi.org/10.1186/s13104-020-4917-5 |
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