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Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning
BACKGROUND: Traumatized earthquake survivors may develop poor memory function. Resting-state functional magnetic resonance imaging (rs-fMRI) and machine learning techniques may one day aid the clinical assessment of individual psychiatric patients. This study aims to use machine learning with Rs-fMR...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6998246/ https://www.ncbi.nlm.nih.gov/pubmed/32013935 http://dx.doi.org/10.1186/s12888-020-2452-5 |
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author | Li, Yuchen Zhu, Hongru Ren, Zhengjia Lui, Su Yuan, Minlan Gong, Qiyong Yuan, Cui Gao, Meng Qiu, Changjian Zhang, Wei |
author_facet | Li, Yuchen Zhu, Hongru Ren, Zhengjia Lui, Su Yuan, Minlan Gong, Qiyong Yuan, Cui Gao, Meng Qiu, Changjian Zhang, Wei |
author_sort | Li, Yuchen |
collection | PubMed |
description | BACKGROUND: Traumatized earthquake survivors may develop poor memory function. Resting-state functional magnetic resonance imaging (rs-fMRI) and machine learning techniques may one day aid the clinical assessment of individual psychiatric patients. This study aims to use machine learning with Rs-fMRI from the perspectives of neurophysiology and neuroimaging to explore the association between it and the individual memory function of trauma survivors. METHODS: Rs-fMRI data was acquired for eighty-nine survivors (male (33%), average age (SD):45.18(6.31) years) of Wenchuan earthquakes in 2008 each of whom was screened by experienced psychiatrists based on the clinician-administered post-traumatic stress disorder (PTSD) scale (CAPS), and their memory function scores were determined by the Wechsler Memory Scale-IV (WMS-IV). We explored which memory function scores were significantly associated with CAPS scores. Using simple multiple kernel learning (MKL), Rs-fMRI was used to predict the memory function scores that were associated with CAPS scores. A support vector machine (SVM) was also used to make classifications in trauma survivors with or without PTSD. RESULTS: Spatial addition (SA), which is defined by spatial working memory function, was negatively correlated with the total CAPS score (r = − 0.22, P = 0.04). The use of simple MKL allowed quantitative association of SA scores with statistically significant accuracy (correlation = 0.28, P = 0.03; mean squared error = 8.36; P = 0.04). The left middle frontal gyrus and the left precuneus contributed the largest proportion to the simple MKL association frame. The SVM could not make a quantitative classification of diagnosis with statistically significant accuracy. LIMITATIONS: The use of the cross-sectional study design after exposure to an earthquake and the leave-one-out cross-validation (LOOCV) increases the risk of overfitting. CONCLUSION: Spontaneous brain activity of the left middle frontal gyrus and the left precuneus acquired by rs-fMRI may be a brain mechanism of visual working memory that is related to PTSD symptoms. Machine learning may be a useful tool in the identification of brain mechanisms of memory impairment in trauma survivors. |
format | Online Article Text |
id | pubmed-6998246 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-69982462020-02-05 Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning Li, Yuchen Zhu, Hongru Ren, Zhengjia Lui, Su Yuan, Minlan Gong, Qiyong Yuan, Cui Gao, Meng Qiu, Changjian Zhang, Wei BMC Psychiatry Research Article BACKGROUND: Traumatized earthquake survivors may develop poor memory function. Resting-state functional magnetic resonance imaging (rs-fMRI) and machine learning techniques may one day aid the clinical assessment of individual psychiatric patients. This study aims to use machine learning with Rs-fMRI from the perspectives of neurophysiology and neuroimaging to explore the association between it and the individual memory function of trauma survivors. METHODS: Rs-fMRI data was acquired for eighty-nine survivors (male (33%), average age (SD):45.18(6.31) years) of Wenchuan earthquakes in 2008 each of whom was screened by experienced psychiatrists based on the clinician-administered post-traumatic stress disorder (PTSD) scale (CAPS), and their memory function scores were determined by the Wechsler Memory Scale-IV (WMS-IV). We explored which memory function scores were significantly associated with CAPS scores. Using simple multiple kernel learning (MKL), Rs-fMRI was used to predict the memory function scores that were associated with CAPS scores. A support vector machine (SVM) was also used to make classifications in trauma survivors with or without PTSD. RESULTS: Spatial addition (SA), which is defined by spatial working memory function, was negatively correlated with the total CAPS score (r = − 0.22, P = 0.04). The use of simple MKL allowed quantitative association of SA scores with statistically significant accuracy (correlation = 0.28, P = 0.03; mean squared error = 8.36; P = 0.04). The left middle frontal gyrus and the left precuneus contributed the largest proportion to the simple MKL association frame. The SVM could not make a quantitative classification of diagnosis with statistically significant accuracy. LIMITATIONS: The use of the cross-sectional study design after exposure to an earthquake and the leave-one-out cross-validation (LOOCV) increases the risk of overfitting. CONCLUSION: Spontaneous brain activity of the left middle frontal gyrus and the left precuneus acquired by rs-fMRI may be a brain mechanism of visual working memory that is related to PTSD symptoms. Machine learning may be a useful tool in the identification of brain mechanisms of memory impairment in trauma survivors. BioMed Central 2020-02-03 /pmc/articles/PMC6998246/ /pubmed/32013935 http://dx.doi.org/10.1186/s12888-020-2452-5 Text en © The Author(s). 2020 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Li, Yuchen Zhu, Hongru Ren, Zhengjia Lui, Su Yuan, Minlan Gong, Qiyong Yuan, Cui Gao, Meng Qiu, Changjian Zhang, Wei Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title | Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title_full | Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title_fullStr | Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title_full_unstemmed | Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title_short | Exploring memory function in earthquake trauma survivors with resting-state fMRI and machine learning |
title_sort | exploring memory function in earthquake trauma survivors with resting-state fmri and machine learning |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6998246/ https://www.ncbi.nlm.nih.gov/pubmed/32013935 http://dx.doi.org/10.1186/s12888-020-2452-5 |
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