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CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging

BACKGROUND: Cox proportional hazard model (CPH) is commonly used in clinical research for survival analysis. In quantitative medical imaging (radiomics) studies, CPH plays an important role in feature reduction and modeling. However, the underlying linear assumption of CPH model limits the prognosti...

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Autores principales: Zhang, Yucheng, Lobo-Mueller, Edrise M., Karanicolas, Paul, Gallinger, Steven, Haider, Masoom A., Khalvati, Farzad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6998249/
https://www.ncbi.nlm.nih.gov/pubmed/32013871
http://dx.doi.org/10.1186/s12880-020-0418-1
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author Zhang, Yucheng
Lobo-Mueller, Edrise M.
Karanicolas, Paul
Gallinger, Steven
Haider, Masoom A.
Khalvati, Farzad
author_facet Zhang, Yucheng
Lobo-Mueller, Edrise M.
Karanicolas, Paul
Gallinger, Steven
Haider, Masoom A.
Khalvati, Farzad
author_sort Zhang, Yucheng
collection PubMed
description BACKGROUND: Cox proportional hazard model (CPH) is commonly used in clinical research for survival analysis. In quantitative medical imaging (radiomics) studies, CPH plays an important role in feature reduction and modeling. However, the underlying linear assumption of CPH model limits the prognostic performance. In this work, using transfer learning, a convolutional neural network (CNN) based survival model was built and tested on preoperative CT images of resectable Pancreatic Ductal Adenocarcinoma (PDAC) patients. RESULTS: The proposed CNN-based survival model outperformed the traditional CPH-based radiomics approach in terms of concordance index and index of prediction accuracy, providing a better fit for patients’ survival patterns. CONCLUSIONS: The proposed CNN-based survival model outperforms CPH-based radiomics pipeline in PDAC prognosis. This approach offers a better fit for survival patterns based on CT images and overcomes the limitations of conventional survival models.
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spelling pubmed-69982492020-02-05 CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging Zhang, Yucheng Lobo-Mueller, Edrise M. Karanicolas, Paul Gallinger, Steven Haider, Masoom A. Khalvati, Farzad BMC Med Imaging Research Article BACKGROUND: Cox proportional hazard model (CPH) is commonly used in clinical research for survival analysis. In quantitative medical imaging (radiomics) studies, CPH plays an important role in feature reduction and modeling. However, the underlying linear assumption of CPH model limits the prognostic performance. In this work, using transfer learning, a convolutional neural network (CNN) based survival model was built and tested on preoperative CT images of resectable Pancreatic Ductal Adenocarcinoma (PDAC) patients. RESULTS: The proposed CNN-based survival model outperformed the traditional CPH-based radiomics approach in terms of concordance index and index of prediction accuracy, providing a better fit for patients’ survival patterns. CONCLUSIONS: The proposed CNN-based survival model outperforms CPH-based radiomics pipeline in PDAC prognosis. This approach offers a better fit for survival patterns based on CT images and overcomes the limitations of conventional survival models. BioMed Central 2020-02-03 /pmc/articles/PMC6998249/ /pubmed/32013871 http://dx.doi.org/10.1186/s12880-020-0418-1 Text en © The Author(s). 2020 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Zhang, Yucheng
Lobo-Mueller, Edrise M.
Karanicolas, Paul
Gallinger, Steven
Haider, Masoom A.
Khalvati, Farzad
CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title_full CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title_fullStr CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title_full_unstemmed CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title_short CNN-based survival model for pancreatic ductal adenocarcinoma in medical imaging
title_sort cnn-based survival model for pancreatic ductal adenocarcinoma in medical imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6998249/
https://www.ncbi.nlm.nih.gov/pubmed/32013871
http://dx.doi.org/10.1186/s12880-020-0418-1
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