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Lymelight: forecasting Lyme disease risk using web search data

Lyme disease is the most common tick-borne disease in the Northern Hemisphere. Existing estimates of Lyme disease spread are delayed a year or more. We introduce Lymelight—a new method for monitoring the incidence of Lyme disease in real-time. We use a machine-learned classifier of web search sessio...

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Autores principales: Sadilek, Adam, Hswen, Yulin, Bavadekar, Shailesh, Shekel, Tomer, Brownstein, John S., Gabrilovich, Evgeniy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7000681/
https://www.ncbi.nlm.nih.gov/pubmed/32047861
http://dx.doi.org/10.1038/s41746-020-0222-x
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author Sadilek, Adam
Hswen, Yulin
Bavadekar, Shailesh
Shekel, Tomer
Brownstein, John S.
Gabrilovich, Evgeniy
author_facet Sadilek, Adam
Hswen, Yulin
Bavadekar, Shailesh
Shekel, Tomer
Brownstein, John S.
Gabrilovich, Evgeniy
author_sort Sadilek, Adam
collection PubMed
description Lyme disease is the most common tick-borne disease in the Northern Hemisphere. Existing estimates of Lyme disease spread are delayed a year or more. We introduce Lymelight—a new method for monitoring the incidence of Lyme disease in real-time. We use a machine-learned classifier of web search sessions to estimate the number of individuals who search for possible Lyme disease symptoms in a given geographical area for two years, 2014 and 2015. We evaluate Lymelight using the official case count data from CDC and find a 92% correlation (p < 0.001) at county level. Importantly, using web search data allows us not only to assess the incidence of the disease, but also to examine the appropriateness of treatments subsequently searched for by the users. Public health implications of our work include monitoring the spread of vector-borne diseases in a timely and scalable manner, complementing existing approaches through real-time detection, which can enable more timely interventions. Our analysis of treatment searches may also help reduce misdiagnosis of the disease.
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spelling pubmed-70006812020-02-11 Lymelight: forecasting Lyme disease risk using web search data Sadilek, Adam Hswen, Yulin Bavadekar, Shailesh Shekel, Tomer Brownstein, John S. Gabrilovich, Evgeniy NPJ Digit Med Article Lyme disease is the most common tick-borne disease in the Northern Hemisphere. Existing estimates of Lyme disease spread are delayed a year or more. We introduce Lymelight—a new method for monitoring the incidence of Lyme disease in real-time. We use a machine-learned classifier of web search sessions to estimate the number of individuals who search for possible Lyme disease symptoms in a given geographical area for two years, 2014 and 2015. We evaluate Lymelight using the official case count data from CDC and find a 92% correlation (p < 0.001) at county level. Importantly, using web search data allows us not only to assess the incidence of the disease, but also to examine the appropriateness of treatments subsequently searched for by the users. Public health implications of our work include monitoring the spread of vector-borne diseases in a timely and scalable manner, complementing existing approaches through real-time detection, which can enable more timely interventions. Our analysis of treatment searches may also help reduce misdiagnosis of the disease. Nature Publishing Group UK 2020-02-04 /pmc/articles/PMC7000681/ /pubmed/32047861 http://dx.doi.org/10.1038/s41746-020-0222-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sadilek, Adam
Hswen, Yulin
Bavadekar, Shailesh
Shekel, Tomer
Brownstein, John S.
Gabrilovich, Evgeniy
Lymelight: forecasting Lyme disease risk using web search data
title Lymelight: forecasting Lyme disease risk using web search data
title_full Lymelight: forecasting Lyme disease risk using web search data
title_fullStr Lymelight: forecasting Lyme disease risk using web search data
title_full_unstemmed Lymelight: forecasting Lyme disease risk using web search data
title_short Lymelight: forecasting Lyme disease risk using web search data
title_sort lymelight: forecasting lyme disease risk using web search data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7000681/
https://www.ncbi.nlm.nih.gov/pubmed/32047861
http://dx.doi.org/10.1038/s41746-020-0222-x
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