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An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review

INTRODUCTION: Reproducibility is critical to diagnostic accuracy and treatment implementation. Concurrent with clinical reproducibility, research reproducibility establishes whether the use of identical study materials and methodologies in replication efforts permits researchers to arrive at similar...

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Autores principales: Fladie, Ian A., Adewumi, Tomi M., Vo, Nam H., Tritz, Daniel J., Vassar, Matt B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7000850/
https://www.ncbi.nlm.nih.gov/pubmed/32043031
http://dx.doi.org/10.1016/j.ekir.2019.11.001
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author Fladie, Ian A.
Adewumi, Tomi M.
Vo, Nam H.
Tritz, Daniel J.
Vassar, Matt B.
author_facet Fladie, Ian A.
Adewumi, Tomi M.
Vo, Nam H.
Tritz, Daniel J.
Vassar, Matt B.
author_sort Fladie, Ian A.
collection PubMed
description INTRODUCTION: Reproducibility is critical to diagnostic accuracy and treatment implementation. Concurrent with clinical reproducibility, research reproducibility establishes whether the use of identical study materials and methodologies in replication efforts permits researchers to arrive at similar results and conclusions. In this study, we address this gap by evaluating nephrology literature for common indicators of transparent and reproducible research. METHODS: We searched the National Library of Medicine catalog to identify 36 MEDLINE-indexed, English-language nephrology journals. We randomly sampled 300 publications published between January 1, 2014, and December 31, 2018. RESULTS: Our search yielded 28,835 publications, of which we randomly sampled 300 publications. Of the 300 publications, 152 (50.7%) were publicly available, whereas 143 (47.7%) were restricted through paywall and 5 (1.7%) were inaccessible. Of the remaining 295 publications, 123 were excluded because they lack empirical data necessary for reproducibility. Of the 172 publications with empirical data, 43 (25%) reported data availability statements and 4 (2.3%) analysis scripts. Of the 71 publications analyzed for preregistration and protocol availability, 0 (0.0%) provided links to a protocol and 8 (11.3%) were preregistered. CONCLUSION: Our study found that reproducible and transparent research practices are infrequently used by the nephrology research community. Greater efforts should be made by both funders and journals. In doing so, an open science culture may eventually become the norm rather than the exception.
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spelling pubmed-70008502020-02-10 An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review Fladie, Ian A. Adewumi, Tomi M. Vo, Nam H. Tritz, Daniel J. Vassar, Matt B. Kidney Int Rep Clinical Research INTRODUCTION: Reproducibility is critical to diagnostic accuracy and treatment implementation. Concurrent with clinical reproducibility, research reproducibility establishes whether the use of identical study materials and methodologies in replication efforts permits researchers to arrive at similar results and conclusions. In this study, we address this gap by evaluating nephrology literature for common indicators of transparent and reproducible research. METHODS: We searched the National Library of Medicine catalog to identify 36 MEDLINE-indexed, English-language nephrology journals. We randomly sampled 300 publications published between January 1, 2014, and December 31, 2018. RESULTS: Our search yielded 28,835 publications, of which we randomly sampled 300 publications. Of the 300 publications, 152 (50.7%) were publicly available, whereas 143 (47.7%) were restricted through paywall and 5 (1.7%) were inaccessible. Of the remaining 295 publications, 123 were excluded because they lack empirical data necessary for reproducibility. Of the 172 publications with empirical data, 43 (25%) reported data availability statements and 4 (2.3%) analysis scripts. Of the 71 publications analyzed for preregistration and protocol availability, 0 (0.0%) provided links to a protocol and 8 (11.3%) were preregistered. CONCLUSION: Our study found that reproducible and transparent research practices are infrequently used by the nephrology research community. Greater efforts should be made by both funders and journals. In doing so, an open science culture may eventually become the norm rather than the exception. Elsevier 2019-11-13 /pmc/articles/PMC7000850/ /pubmed/32043031 http://dx.doi.org/10.1016/j.ekir.2019.11.001 Text en © 2019 International Society of Nephrology. Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Clinical Research
Fladie, Ian A.
Adewumi, Tomi M.
Vo, Nam H.
Tritz, Daniel J.
Vassar, Matt B.
An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title_full An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title_fullStr An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title_full_unstemmed An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title_short An Evaluation of Nephrology Literature for Transparency and Reproducibility Indicators: Cross-Sectional Review
title_sort evaluation of nephrology literature for transparency and reproducibility indicators: cross-sectional review
topic Clinical Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7000850/
https://www.ncbi.nlm.nih.gov/pubmed/32043031
http://dx.doi.org/10.1016/j.ekir.2019.11.001
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