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Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data
In practice, the collected spectra are very often composes of complex overtone and many overlapping peaks which may lead to misinterpretation because of its significant nonlinear characteristics. Using linear solution might not be appropriate. In addition, with a high-dimension of dataset due to lar...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7002778/ https://www.ncbi.nlm.nih.gov/pubmed/32042959 http://dx.doi.org/10.1016/j.heliyon.2020.e03176 |
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author | Silalahi, Divo Dharma Midi, Habshah Arasan, Jayanthi Mustafa, Mohd Shafie Caliman, Jean-Pierre |
author_facet | Silalahi, Divo Dharma Midi, Habshah Arasan, Jayanthi Mustafa, Mohd Shafie Caliman, Jean-Pierre |
author_sort | Silalahi, Divo Dharma |
collection | PubMed |
description | In practice, the collected spectra are very often composes of complex overtone and many overlapping peaks which may lead to misinterpretation because of its significant nonlinear characteristics. Using linear solution might not be appropriate. In addition, with a high-dimension of dataset due to large number of observations and data points the classical multiple regressions will neglect to fit. These complexities commonly will impact to multicollinearity problem, furthermore the risk of contamination of multiple outliers and high leverage points also increases. To address these problems, a new method called Kernel Partial Diagnostic Robust Potential (KPDRGP) is introduced. The method allows the nonlinear solution which maps nonlinearly the original input [Formula: see text] matrix into higher dimensional feature mapping with corresponds to the Reproducing Kernel Hilbert Spaces (RKHS). In dimensional reduction, the method replaces the dot products calculation of elements in the mapped data to a nonlinear function in the original input space. To prevent the contamination of the multiple outlier and high leverage points the robust procedure using Diagnostic Robust Generalized Potentials (DRGP) algorithm was used. The results verified that using the simulation and real data, the proposed KPDRGP method was superior to the methods in the class of non-kernel and some other robust methods with kernel solution. |
format | Online Article Text |
id | pubmed-7002778 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-70027782020-02-10 Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data Silalahi, Divo Dharma Midi, Habshah Arasan, Jayanthi Mustafa, Mohd Shafie Caliman, Jean-Pierre Heliyon Article In practice, the collected spectra are very often composes of complex overtone and many overlapping peaks which may lead to misinterpretation because of its significant nonlinear characteristics. Using linear solution might not be appropriate. In addition, with a high-dimension of dataset due to large number of observations and data points the classical multiple regressions will neglect to fit. These complexities commonly will impact to multicollinearity problem, furthermore the risk of contamination of multiple outliers and high leverage points also increases. To address these problems, a new method called Kernel Partial Diagnostic Robust Potential (KPDRGP) is introduced. The method allows the nonlinear solution which maps nonlinearly the original input [Formula: see text] matrix into higher dimensional feature mapping with corresponds to the Reproducing Kernel Hilbert Spaces (RKHS). In dimensional reduction, the method replaces the dot products calculation of elements in the mapped data to a nonlinear function in the original input space. To prevent the contamination of the multiple outlier and high leverage points the robust procedure using Diagnostic Robust Generalized Potentials (DRGP) algorithm was used. The results verified that using the simulation and real data, the proposed KPDRGP method was superior to the methods in the class of non-kernel and some other robust methods with kernel solution. Elsevier 2020-01-31 /pmc/articles/PMC7002778/ /pubmed/32042959 http://dx.doi.org/10.1016/j.heliyon.2020.e03176 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Silalahi, Divo Dharma Midi, Habshah Arasan, Jayanthi Mustafa, Mohd Shafie Caliman, Jean-Pierre Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title | Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title_full | Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title_fullStr | Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title_full_unstemmed | Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title_short | Kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
title_sort | kernel partial diagnostic robust potential to handle high-dimensional and irregular data space on near infrared spectral data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7002778/ https://www.ncbi.nlm.nih.gov/pubmed/32042959 http://dx.doi.org/10.1016/j.heliyon.2020.e03176 |
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