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Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions
Research synthesis on simple yet general hypotheses and ideas is challenging in scientific disciplines studying highly context‐dependent systems such as medical, social, and biological sciences. This study shows that machine learning, equation‐free statistical modeling of artificial intelligence, is...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7003914/ https://www.ncbi.nlm.nih.gov/pubmed/31219681 http://dx.doi.org/10.1002/jrsm.1363 |
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author | Ryo, Masahiro Jeschke, Jonathan M. Rillig, Matthias C. Heger, Tina |
author_facet | Ryo, Masahiro Jeschke, Jonathan M. Rillig, Matthias C. Heger, Tina |
author_sort | Ryo, Masahiro |
collection | PubMed |
description | Research synthesis on simple yet general hypotheses and ideas is challenging in scientific disciplines studying highly context‐dependent systems such as medical, social, and biological sciences. This study shows that machine learning, equation‐free statistical modeling of artificial intelligence, is a promising synthesis tool for discovering novel patterns and the source of controversy in a general hypothesis. We apply a decision tree algorithm, assuming that evidence from various contexts can be adequately integrated in a hierarchically nested structure. As a case study, we analyzed 163 articles that studied a prominent hypothesis in invasion biology, the enemy release hypothesis. We explored if any of the nine attributes that classify each study can differentiate conclusions as classification problem. Results corroborated that machine learning can be useful for research synthesis, as the algorithm could detect patterns that had been already focused in previous narrative reviews. Compared with the previous synthesis study that assessed the same evidence collection based on experts' judgement, the algorithm has newly proposed that the studies focusing on Asian regions mostly supported the hypothesis, suggesting that more detailed investigations in these regions can enhance our understanding of the hypothesis. We suggest that machine learning algorithms can be a promising synthesis tool especially where studies (a) reformulate a general hypothesis from different perspectives, (b) use different methods or variables, or (c) report insufficient information for conducting meta‐analyses. |
format | Online Article Text |
id | pubmed-7003914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70039142020-02-11 Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions Ryo, Masahiro Jeschke, Jonathan M. Rillig, Matthias C. Heger, Tina Res Synth Methods Research Articles Research synthesis on simple yet general hypotheses and ideas is challenging in scientific disciplines studying highly context‐dependent systems such as medical, social, and biological sciences. This study shows that machine learning, equation‐free statistical modeling of artificial intelligence, is a promising synthesis tool for discovering novel patterns and the source of controversy in a general hypothesis. We apply a decision tree algorithm, assuming that evidence from various contexts can be adequately integrated in a hierarchically nested structure. As a case study, we analyzed 163 articles that studied a prominent hypothesis in invasion biology, the enemy release hypothesis. We explored if any of the nine attributes that classify each study can differentiate conclusions as classification problem. Results corroborated that machine learning can be useful for research synthesis, as the algorithm could detect patterns that had been already focused in previous narrative reviews. Compared with the previous synthesis study that assessed the same evidence collection based on experts' judgement, the algorithm has newly proposed that the studies focusing on Asian regions mostly supported the hypothesis, suggesting that more detailed investigations in these regions can enhance our understanding of the hypothesis. We suggest that machine learning algorithms can be a promising synthesis tool especially where studies (a) reformulate a general hypothesis from different perspectives, (b) use different methods or variables, or (c) report insufficient information for conducting meta‐analyses. John Wiley and Sons Inc. 2019-08-05 2020-01 /pmc/articles/PMC7003914/ /pubmed/31219681 http://dx.doi.org/10.1002/jrsm.1363 Text en © 2019 The Authors Research Synthesis Methods Published by John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Ryo, Masahiro Jeschke, Jonathan M. Rillig, Matthias C. Heger, Tina Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title | Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title_full | Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title_fullStr | Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title_full_unstemmed | Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title_short | Machine learning with the hierarchy‐of‐hypotheses (HoH) approach discovers novel pattern in studies on biological invasions |
title_sort | machine learning with the hierarchy‐of‐hypotheses (hoh) approach discovers novel pattern in studies on biological invasions |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7003914/ https://www.ncbi.nlm.nih.gov/pubmed/31219681 http://dx.doi.org/10.1002/jrsm.1363 |
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