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Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering

Cerebral Blood Flow Velocity waveforms acquired via Transcranial Doppler (TCD) can provide evidence for cerebrovascular occlusion and stenosis. Thrombolysis in Brain Ischemia (TIBI) flow grades are widely used for this purpose, but require subjective assessment by expert evaluators to be reliable. I...

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Autores principales: Thorpe, Samuel G., Thibeault, Corey M., Canac, Nicolas, Jalaleddini, Kian, Dorn, Amber, Wilk, Seth J., Devlin, Thomas, Scalzo, Fabien, Hamilton, Robert B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7004309/
https://www.ncbi.nlm.nih.gov/pubmed/32027714
http://dx.doi.org/10.1371/journal.pone.0228642
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author Thorpe, Samuel G.
Thibeault, Corey M.
Canac, Nicolas
Jalaleddini, Kian
Dorn, Amber
Wilk, Seth J.
Devlin, Thomas
Scalzo, Fabien
Hamilton, Robert B.
author_facet Thorpe, Samuel G.
Thibeault, Corey M.
Canac, Nicolas
Jalaleddini, Kian
Dorn, Amber
Wilk, Seth J.
Devlin, Thomas
Scalzo, Fabien
Hamilton, Robert B.
author_sort Thorpe, Samuel G.
collection PubMed
description Cerebral Blood Flow Velocity waveforms acquired via Transcranial Doppler (TCD) can provide evidence for cerebrovascular occlusion and stenosis. Thrombolysis in Brain Ischemia (TIBI) flow grades are widely used for this purpose, but require subjective assessment by expert evaluators to be reliable. In this work we seek to determine whether TCD morphology can be objectively assessed using an unsupervised machine learning approach to waveform categorization. TCD beat waveforms were recorded at multiple depths from the Middle Cerebral Arteries of 106 subjects; 33 with Large Vessel Occlusion (LVO). From each waveform, three morphological features were extracted, quantifying onset of maximal velocity, systolic canopy length, and the number/prominence of peaks/troughs. Spectral clustering identified groups implicit in the resultant three-dimensional feature space, with gap statistic criteria establishing the optimal cluster number. We found that gap statistic disparity was maximized at four clusters, referred to as flow types I, II, III, and IV. Types I and II were primarily composed of control subject waveforms, whereas types III and IV derived mainly from LVO patients. Cluster morphologies for types I and IV aligned clearly with Normal and Blunted TIBI flows, respectively. Types II and III represented commonly observed flow-types not delineated by TIBI, which nonetheless deviate from normal and blunted flows. We conclude that important morphological variability exists beyond that currently quantified by TIBI in populations experiencing or at-risk for acute ischemic stroke, and posit that the observed flow-types provide the foundation for objective methods of real-time automated flow type classification.
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spelling pubmed-70043092020-02-18 Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering Thorpe, Samuel G. Thibeault, Corey M. Canac, Nicolas Jalaleddini, Kian Dorn, Amber Wilk, Seth J. Devlin, Thomas Scalzo, Fabien Hamilton, Robert B. PLoS One Research Article Cerebral Blood Flow Velocity waveforms acquired via Transcranial Doppler (TCD) can provide evidence for cerebrovascular occlusion and stenosis. Thrombolysis in Brain Ischemia (TIBI) flow grades are widely used for this purpose, but require subjective assessment by expert evaluators to be reliable. In this work we seek to determine whether TCD morphology can be objectively assessed using an unsupervised machine learning approach to waveform categorization. TCD beat waveforms were recorded at multiple depths from the Middle Cerebral Arteries of 106 subjects; 33 with Large Vessel Occlusion (LVO). From each waveform, three morphological features were extracted, quantifying onset of maximal velocity, systolic canopy length, and the number/prominence of peaks/troughs. Spectral clustering identified groups implicit in the resultant three-dimensional feature space, with gap statistic criteria establishing the optimal cluster number. We found that gap statistic disparity was maximized at four clusters, referred to as flow types I, II, III, and IV. Types I and II were primarily composed of control subject waveforms, whereas types III and IV derived mainly from LVO patients. Cluster morphologies for types I and IV aligned clearly with Normal and Blunted TIBI flows, respectively. Types II and III represented commonly observed flow-types not delineated by TIBI, which nonetheless deviate from normal and blunted flows. We conclude that important morphological variability exists beyond that currently quantified by TIBI in populations experiencing or at-risk for acute ischemic stroke, and posit that the observed flow-types provide the foundation for objective methods of real-time automated flow type classification. Public Library of Science 2020-02-06 /pmc/articles/PMC7004309/ /pubmed/32027714 http://dx.doi.org/10.1371/journal.pone.0228642 Text en © 2020 Thorpe et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Thorpe, Samuel G.
Thibeault, Corey M.
Canac, Nicolas
Jalaleddini, Kian
Dorn, Amber
Wilk, Seth J.
Devlin, Thomas
Scalzo, Fabien
Hamilton, Robert B.
Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title_full Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title_fullStr Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title_full_unstemmed Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title_short Toward automated classification of pathological transcranial Doppler waveform morphology via spectral clustering
title_sort toward automated classification of pathological transcranial doppler waveform morphology via spectral clustering
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7004309/
https://www.ncbi.nlm.nih.gov/pubmed/32027714
http://dx.doi.org/10.1371/journal.pone.0228642
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