Cargando…
Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma
Purpose: To develop and validate a radiomic signature to identify EGFR mutations in patients with advanced lung adenocarcinoma. Methods: This study involved 201 patients with advanced lung adenocarcinoma (140 in the training cohort and 61 in the validation cohort). A total of 396 features were extra...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005234/ https://www.ncbi.nlm.nih.gov/pubmed/32082997 http://dx.doi.org/10.3389/fonc.2020.00028 |
_version_ | 1783494892250464256 |
---|---|
author | Hong, Duo Xu, Ke Zhang, Lina Wan, Xiaoting Guo, Yan |
author_facet | Hong, Duo Xu, Ke Zhang, Lina Wan, Xiaoting Guo, Yan |
author_sort | Hong, Duo |
collection | PubMed |
description | Purpose: To develop and validate a radiomic signature to identify EGFR mutations in patients with advanced lung adenocarcinoma. Methods: This study involved 201 patients with advanced lung adenocarcinoma (140 in the training cohort and 61 in the validation cohort). A total of 396 features were extracted from manual segmentation based on enhanced and non-enhance CT imaging after image preprocessing. The Lasso algorithm was used for feature selection, 6 machine learning methods were used to construct radiomics models. Receiver operating characteristic (ROC) curve analysis was applied to evaluate the performance of the radiomic signature between different data and methods. A nomogram was developed using clinical factors and the radiomics signature, then it was analyzed based on its discriminatory ability and calibration. Decision curve analysis (DCA) was implemented to evaluate the clinical utility. Results: Ten features for contrast data and eleven features for non-contrast data were selected through LASSO algorithm. The performance of the radiomics signature for contrast images was better than that for non-contrast images in all of the 6 different machine learning methods. Finally, the best radiomics signature was built with logistic regression method based on enhanced CT imaging with an area under the curve (AUC) of 0.851 (95% CI, 0.750 to 0.951) in the validation cohort. A nomogram was developed using the radiomics signature and sex with a C-index of 0.908 (95%CI, 0.862 to 0.954) in the training cohort and 0.835 (95% CI, 0.825 to 0.845) in the validation cohort. It showed good discrimination and calibration (Hosmer-Lemeshow test, P = 0.621 for the training cohort and P = 0.605 for the validation cohort). Conclusion: Radiomics signature can help to distinguish between EGFR positive and wild type advanced lung adenocarcinomas. |
format | Online Article Text |
id | pubmed-7005234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70052342020-02-20 Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma Hong, Duo Xu, Ke Zhang, Lina Wan, Xiaoting Guo, Yan Front Oncol Oncology Purpose: To develop and validate a radiomic signature to identify EGFR mutations in patients with advanced lung adenocarcinoma. Methods: This study involved 201 patients with advanced lung adenocarcinoma (140 in the training cohort and 61 in the validation cohort). A total of 396 features were extracted from manual segmentation based on enhanced and non-enhance CT imaging after image preprocessing. The Lasso algorithm was used for feature selection, 6 machine learning methods were used to construct radiomics models. Receiver operating characteristic (ROC) curve analysis was applied to evaluate the performance of the radiomic signature between different data and methods. A nomogram was developed using clinical factors and the radiomics signature, then it was analyzed based on its discriminatory ability and calibration. Decision curve analysis (DCA) was implemented to evaluate the clinical utility. Results: Ten features for contrast data and eleven features for non-contrast data were selected through LASSO algorithm. The performance of the radiomics signature for contrast images was better than that for non-contrast images in all of the 6 different machine learning methods. Finally, the best radiomics signature was built with logistic regression method based on enhanced CT imaging with an area under the curve (AUC) of 0.851 (95% CI, 0.750 to 0.951) in the validation cohort. A nomogram was developed using the radiomics signature and sex with a C-index of 0.908 (95%CI, 0.862 to 0.954) in the training cohort and 0.835 (95% CI, 0.825 to 0.845) in the validation cohort. It showed good discrimination and calibration (Hosmer-Lemeshow test, P = 0.621 for the training cohort and P = 0.605 for the validation cohort). Conclusion: Radiomics signature can help to distinguish between EGFR positive and wild type advanced lung adenocarcinomas. Frontiers Media S.A. 2020-01-31 /pmc/articles/PMC7005234/ /pubmed/32082997 http://dx.doi.org/10.3389/fonc.2020.00028 Text en Copyright © 2020 Hong, Xu, Zhang, Wan and Guo. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Hong, Duo Xu, Ke Zhang, Lina Wan, Xiaoting Guo, Yan Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title | Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title_full | Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title_fullStr | Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title_full_unstemmed | Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title_short | Radiomics Signature as a Predictive Factor for EGFR Mutations in Advanced Lung Adenocarcinoma |
title_sort | radiomics signature as a predictive factor for egfr mutations in advanced lung adenocarcinoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005234/ https://www.ncbi.nlm.nih.gov/pubmed/32082997 http://dx.doi.org/10.3389/fonc.2020.00028 |
work_keys_str_mv | AT hongduo radiomicssignatureasapredictivefactorforegfrmutationsinadvancedlungadenocarcinoma AT xuke radiomicssignatureasapredictivefactorforegfrmutationsinadvancedlungadenocarcinoma AT zhanglina radiomicssignatureasapredictivefactorforegfrmutationsinadvancedlungadenocarcinoma AT wanxiaoting radiomicssignatureasapredictivefactorforegfrmutationsinadvancedlungadenocarcinoma AT guoyan radiomicssignatureasapredictivefactorforegfrmutationsinadvancedlungadenocarcinoma |