Cargando…

Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels

BACKGROUND: Y‐chromosomal genetic marker haplotypes of individuals can define the paternal kinship or genealogies to which they belong and further provide clues for forensic individual identifications. Studying the genetic structure of the Mongolian group will help to bring to light the Mongolian et...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Yanfang, Yu, Tingting, Mei, Shuyan, Jin, Xiaoye, Lan, Qiong, Zhou, Yongsong, Fang, Yating, Xie, Tong, Huang, Jiabin, Zhu, Bofeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005640/
https://www.ncbi.nlm.nih.gov/pubmed/31876394
http://dx.doi.org/10.1002/mgg3.1097
_version_ 1783494979929243648
author Liu, Yanfang
Yu, Tingting
Mei, Shuyan
Jin, Xiaoye
Lan, Qiong
Zhou, Yongsong
Fang, Yating
Xie, Tong
Huang, Jiabin
Zhu, Bofeng
author_facet Liu, Yanfang
Yu, Tingting
Mei, Shuyan
Jin, Xiaoye
Lan, Qiong
Zhou, Yongsong
Fang, Yating
Xie, Tong
Huang, Jiabin
Zhu, Bofeng
author_sort Liu, Yanfang
collection PubMed
description BACKGROUND: Y‐chromosomal genetic marker haplotypes of individuals can define the paternal kinship or genealogies to which they belong and further provide clues for forensic individual identifications. Studying the genetic structure of the Mongolian group will help to bring to light the Mongolian ethnic origin, and explicate the genetic affinities among the studied and compared populations. Some forensic scientists have studied the genetic background of the Mongolian group based on different molecular genetic markers. These studies were of very great reference significance for the Mongolian group genetic research, whereas the investigation of Y‐STR haplotype data in the Xinjiang Mongolian group is still insufficient. METHODS: Genetic characteristics of 182 unrelated healthy male Mongolian individuals were revealed by 41 Y‐chromosomal short tandem repeat and 3 insertion/deletion molecular genetic markers. Furthermore, analyses of molecular variance programs, multi‐dimensional scaling plots, and phylogenetic tree reconstructions were operated to explore the genetic relationships of the Xinjiang Mongolian group with comparative 23 populations from China and 33 populations from worldwide nations. RESULTS: The genetic diversity values ranged from 0.0641 (rs771783753) to 0.9502 (DYF387S1). A total of 165 distinct haplotypes were identified, of which 150 (90.91%) were unique. The discrimination capacity, match probability, and haplotype diversity of 44 loci were 0.9066, 0.0067, and 0.9988, respectively. Additionally, the Mongolian group had the most intimate relationship with Gansu Dongxiang (R (ST) = 0.0165), followed by HulunBuir Mongolian (R (ST) = 0.0187), Inner Mongolia Daur (R (ST) = 0.0202) as well as other three minority ethnic groups from the Xinjiang region (R (ST) < 0.05) in all compared Chinese populations, and clustered together with the majority of Asian populations in a worldwide scale. CONCLUSIONS: Consequently, the 44 loci could be well applied in forensic applications of the Mongolian group. The haplotypes available in here made new contributions to the existing population genetic information and would be of great value in population studies.
format Online
Article
Text
id pubmed-7005640
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-70056402020-02-13 Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels Liu, Yanfang Yu, Tingting Mei, Shuyan Jin, Xiaoye Lan, Qiong Zhou, Yongsong Fang, Yating Xie, Tong Huang, Jiabin Zhu, Bofeng Mol Genet Genomic Med Original Articles BACKGROUND: Y‐chromosomal genetic marker haplotypes of individuals can define the paternal kinship or genealogies to which they belong and further provide clues for forensic individual identifications. Studying the genetic structure of the Mongolian group will help to bring to light the Mongolian ethnic origin, and explicate the genetic affinities among the studied and compared populations. Some forensic scientists have studied the genetic background of the Mongolian group based on different molecular genetic markers. These studies were of very great reference significance for the Mongolian group genetic research, whereas the investigation of Y‐STR haplotype data in the Xinjiang Mongolian group is still insufficient. METHODS: Genetic characteristics of 182 unrelated healthy male Mongolian individuals were revealed by 41 Y‐chromosomal short tandem repeat and 3 insertion/deletion molecular genetic markers. Furthermore, analyses of molecular variance programs, multi‐dimensional scaling plots, and phylogenetic tree reconstructions were operated to explore the genetic relationships of the Xinjiang Mongolian group with comparative 23 populations from China and 33 populations from worldwide nations. RESULTS: The genetic diversity values ranged from 0.0641 (rs771783753) to 0.9502 (DYF387S1). A total of 165 distinct haplotypes were identified, of which 150 (90.91%) were unique. The discrimination capacity, match probability, and haplotype diversity of 44 loci were 0.9066, 0.0067, and 0.9988, respectively. Additionally, the Mongolian group had the most intimate relationship with Gansu Dongxiang (R (ST) = 0.0165), followed by HulunBuir Mongolian (R (ST) = 0.0187), Inner Mongolia Daur (R (ST) = 0.0202) as well as other three minority ethnic groups from the Xinjiang region (R (ST) < 0.05) in all compared Chinese populations, and clustered together with the majority of Asian populations in a worldwide scale. CONCLUSIONS: Consequently, the 44 loci could be well applied in forensic applications of the Mongolian group. The haplotypes available in here made new contributions to the existing population genetic information and would be of great value in population studies. John Wiley and Sons Inc. 2019-12-26 /pmc/articles/PMC7005640/ /pubmed/31876394 http://dx.doi.org/10.1002/mgg3.1097 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Original Articles
Liu, Yanfang
Yu, Tingting
Mei, Shuyan
Jin, Xiaoye
Lan, Qiong
Zhou, Yongsong
Fang, Yating
Xie, Tong
Huang, Jiabin
Zhu, Bofeng
Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title_full Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title_fullStr Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title_full_unstemmed Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title_short Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye‐labeled typing system including 41 Y‐STRs and 3 Y‐InDels
title_sort forensic characteristics and genetic affinity analyses of xinjiang mongolian group using a novel six fluorescent dye‐labeled typing system including 41 y‐strs and 3 y‐indels
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005640/
https://www.ncbi.nlm.nih.gov/pubmed/31876394
http://dx.doi.org/10.1002/mgg3.1097
work_keys_str_mv AT liuyanfang forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT yutingting forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT meishuyan forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT jinxiaoye forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT lanqiong forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT zhouyongsong forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT fangyating forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT xietong forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT huangjiabin forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels
AT zhubofeng forensiccharacteristicsandgeneticaffinityanalysesofxinjiangmongoliangroupusinganovelsixfluorescentdyelabeledtypingsystemincluding41ystrsand3yindels