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Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients
BACKGROUND: Next‐generation sequencing (NGS)‐based panels have gained traction as a strategy for reproductive carrier screening. Their value for screening Ashkenazi Jewish (AJ) individuals, who have benefited greatly from population‐wide targeted testing, as well as Sephardi/Mizrahi Jewish (SMJ) ind...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005669/ https://www.ncbi.nlm.nih.gov/pubmed/31880409 http://dx.doi.org/10.1002/mgg3.1053 |
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author | Akler, Gidon Birch, Ashley H. Schreiber‐Agus, Nicole Cai, Xiaoqiang Cai, Guiqing Shi, Lisong Yu, Chunli Larmore, Anastasia M. Mendiratta‐Vij, Geetu Elkhoury, Lama Dillon, Mitchell W. Zhu, Jun Mclellan, Andrew S. Suer, Funda E. Webb, Bryn D. Schadt, Eric E. Kornreich, Ruth Edelmann, Lisa |
author_facet | Akler, Gidon Birch, Ashley H. Schreiber‐Agus, Nicole Cai, Xiaoqiang Cai, Guiqing Shi, Lisong Yu, Chunli Larmore, Anastasia M. Mendiratta‐Vij, Geetu Elkhoury, Lama Dillon, Mitchell W. Zhu, Jun Mclellan, Andrew S. Suer, Funda E. Webb, Bryn D. Schadt, Eric E. Kornreich, Ruth Edelmann, Lisa |
author_sort | Akler, Gidon |
collection | PubMed |
description | BACKGROUND: Next‐generation sequencing (NGS)‐based panels have gained traction as a strategy for reproductive carrier screening. Their value for screening Ashkenazi Jewish (AJ) individuals, who have benefited greatly from population‐wide targeted testing, as well as Sephardi/Mizrahi Jewish (SMJ) individuals (an underserved population), has not been fully explored. METHODS: The clinical utilization by 6,805 self‐reported Jewish individuals of an expanded NGS panel, along with several ancillary assays, was assessed retrospectively. Data were extracted for a subset of 96 diseases that, during the panel design phase, were classified as being AJ‐, SMJ‐, or pan‐Jewish/pan‐ethnic‐relevant. RESULTS: 64.6% of individuals were identified as carriers of one or more of these 96 diseases. Over 80% of the reported variants would have been missed by following recommended AJ screening guidelines. 10.7% of variants reported for AJs were in “SMJ‐relevant genes,” and 31.2% reported for SMJs were in “AJ‐relevant genes.” Roughly 2.5% of individuals carried a novel, likely pathogenic variant. One in 16 linked cohort couples was identified as a carrier couple for at least one of these 96 diseases. CONCLUSION: For maximal carrier identification, this study supports using expanded NGS panels for individuals of all Jewish backgrounds. This approach can better empower at‐risk couples for reproductive decision making. |
format | Online Article Text |
id | pubmed-7005669 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-70056692020-02-13 Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients Akler, Gidon Birch, Ashley H. Schreiber‐Agus, Nicole Cai, Xiaoqiang Cai, Guiqing Shi, Lisong Yu, Chunli Larmore, Anastasia M. Mendiratta‐Vij, Geetu Elkhoury, Lama Dillon, Mitchell W. Zhu, Jun Mclellan, Andrew S. Suer, Funda E. Webb, Bryn D. Schadt, Eric E. Kornreich, Ruth Edelmann, Lisa Mol Genet Genomic Med Original Articles BACKGROUND: Next‐generation sequencing (NGS)‐based panels have gained traction as a strategy for reproductive carrier screening. Their value for screening Ashkenazi Jewish (AJ) individuals, who have benefited greatly from population‐wide targeted testing, as well as Sephardi/Mizrahi Jewish (SMJ) individuals (an underserved population), has not been fully explored. METHODS: The clinical utilization by 6,805 self‐reported Jewish individuals of an expanded NGS panel, along with several ancillary assays, was assessed retrospectively. Data were extracted for a subset of 96 diseases that, during the panel design phase, were classified as being AJ‐, SMJ‐, or pan‐Jewish/pan‐ethnic‐relevant. RESULTS: 64.6% of individuals were identified as carriers of one or more of these 96 diseases. Over 80% of the reported variants would have been missed by following recommended AJ screening guidelines. 10.7% of variants reported for AJs were in “SMJ‐relevant genes,” and 31.2% reported for SMJs were in “AJ‐relevant genes.” Roughly 2.5% of individuals carried a novel, likely pathogenic variant. One in 16 linked cohort couples was identified as a carrier couple for at least one of these 96 diseases. CONCLUSION: For maximal carrier identification, this study supports using expanded NGS panels for individuals of all Jewish backgrounds. This approach can better empower at‐risk couples for reproductive decision making. John Wiley and Sons Inc. 2019-12-27 /pmc/articles/PMC7005669/ /pubmed/31880409 http://dx.doi.org/10.1002/mgg3.1053 Text en © 2019 Sema4. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Akler, Gidon Birch, Ashley H. Schreiber‐Agus, Nicole Cai, Xiaoqiang Cai, Guiqing Shi, Lisong Yu, Chunli Larmore, Anastasia M. Mendiratta‐Vij, Geetu Elkhoury, Lama Dillon, Mitchell W. Zhu, Jun Mclellan, Andrew S. Suer, Funda E. Webb, Bryn D. Schadt, Eric E. Kornreich, Ruth Edelmann, Lisa Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title | Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title_full | Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title_fullStr | Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title_full_unstemmed | Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title_short | Lessons learned from expanded reproductive carrier screening in self‐reported Ashkenazi, Sephardi, and Mizrahi Jewish patients |
title_sort | lessons learned from expanded reproductive carrier screening in self‐reported ashkenazi, sephardi, and mizrahi jewish patients |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7005669/ https://www.ncbi.nlm.nih.gov/pubmed/31880409 http://dx.doi.org/10.1002/mgg3.1053 |
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