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OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system

Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enab...

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Autores principales: Applegate, Matthew B., Karrobi, Kavon, Angelo Jr., Joseph P., Austin, Wyatt, Tabassum, Syeda M., Aguénounon, Enagnon, Tilbury, Karissa, Saager, Rolf B., Gioux, Sylvain, Roblyer, Darren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7008504/
https://www.ncbi.nlm.nih.gov/pubmed/31925946
http://dx.doi.org/10.1117/1.JBO.25.1.016002
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author Applegate, Matthew B.
Karrobi, Kavon
Angelo Jr., Joseph P.
Austin, Wyatt
Tabassum, Syeda M.
Aguénounon, Enagnon
Tilbury, Karissa
Saager, Rolf B.
Gioux, Sylvain
Roblyer, Darren
author_facet Applegate, Matthew B.
Karrobi, Kavon
Angelo Jr., Joseph P.
Austin, Wyatt
Tabassum, Syeda M.
Aguénounon, Enagnon
Tilbury, Karissa
Saager, Rolf B.
Gioux, Sylvain
Roblyer, Darren
author_sort Applegate, Matthew B.
collection PubMed
description Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying [Formula: see text] and [Formula: see text] as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of [Formula: see text] and [Formula: see text] with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of [Formula: see text] in [Formula: see text] and [Formula: see text] in [Formula: see text] , compared to a commercial SFDI system. Bland–Altman analysis revealed the limits of agreement between the two systems to be [Formula: see text] for [Formula: see text] and [Formula: see text] to [Formula: see text] for [Formula: see text]. The openSFDI system had low drift with an average standard deviation of [Formula: see text] and [Formula: see text] in [Formula: see text] and [Formula: see text] , respectively. Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging.
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spelling pubmed-70085042020-02-14 OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system Applegate, Matthew B. Karrobi, Kavon Angelo Jr., Joseph P. Austin, Wyatt Tabassum, Syeda M. Aguénounon, Enagnon Tilbury, Karissa Saager, Rolf B. Gioux, Sylvain Roblyer, Darren J Biomed Opt Imaging Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying [Formula: see text] and [Formula: see text] as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of [Formula: see text] and [Formula: see text] with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of [Formula: see text] in [Formula: see text] and [Formula: see text] in [Formula: see text] , compared to a commercial SFDI system. Bland–Altman analysis revealed the limits of agreement between the two systems to be [Formula: see text] for [Formula: see text] and [Formula: see text] to [Formula: see text] for [Formula: see text]. The openSFDI system had low drift with an average standard deviation of [Formula: see text] and [Formula: see text] in [Formula: see text] and [Formula: see text] , respectively. Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging. Society of Photo-Optical Instrumentation Engineers 2020-01-10 2020-01 /pmc/articles/PMC7008504/ /pubmed/31925946 http://dx.doi.org/10.1117/1.JBO.25.1.016002 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Imaging
Applegate, Matthew B.
Karrobi, Kavon
Angelo Jr., Joseph P.
Austin, Wyatt
Tabassum, Syeda M.
Aguénounon, Enagnon
Tilbury, Karissa
Saager, Rolf B.
Gioux, Sylvain
Roblyer, Darren
OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title_full OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title_fullStr OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title_full_unstemmed OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title_short OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
title_sort opensfdi: an open-source guide for constructing a spatial frequency domain imaging system
topic Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7008504/
https://www.ncbi.nlm.nih.gov/pubmed/31925946
http://dx.doi.org/10.1117/1.JBO.25.1.016002
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