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OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system
Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enab...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7008504/ https://www.ncbi.nlm.nih.gov/pubmed/31925946 http://dx.doi.org/10.1117/1.JBO.25.1.016002 |
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author | Applegate, Matthew B. Karrobi, Kavon Angelo Jr., Joseph P. Austin, Wyatt Tabassum, Syeda M. Aguénounon, Enagnon Tilbury, Karissa Saager, Rolf B. Gioux, Sylvain Roblyer, Darren |
author_facet | Applegate, Matthew B. Karrobi, Kavon Angelo Jr., Joseph P. Austin, Wyatt Tabassum, Syeda M. Aguénounon, Enagnon Tilbury, Karissa Saager, Rolf B. Gioux, Sylvain Roblyer, Darren |
author_sort | Applegate, Matthew B. |
collection | PubMed |
description | Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying [Formula: see text] and [Formula: see text] as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of [Formula: see text] and [Formula: see text] with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of [Formula: see text] in [Formula: see text] and [Formula: see text] in [Formula: see text] , compared to a commercial SFDI system. Bland–Altman analysis revealed the limits of agreement between the two systems to be [Formula: see text] for [Formula: see text] and [Formula: see text] to [Formula: see text] for [Formula: see text]. The openSFDI system had low drift with an average standard deviation of [Formula: see text] and [Formula: see text] in [Formula: see text] and [Formula: see text] , respectively. Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging. |
format | Online Article Text |
id | pubmed-7008504 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-70085042020-02-14 OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system Applegate, Matthew B. Karrobi, Kavon Angelo Jr., Joseph P. Austin, Wyatt Tabassum, Syeda M. Aguénounon, Enagnon Tilbury, Karissa Saager, Rolf B. Gioux, Sylvain Roblyer, Darren J Biomed Opt Imaging Significance: Spatial frequency domain imaging (SFDI) is a diffuse optical measurement technique that can quantify tissue optical absorption ([Formula: see text]) and reduced scattering ([Formula: see text]) on a pixel-by-pixel basis. Measurements of [Formula: see text] at different wavelengths enable the extraction of molar concentrations of tissue chromophores over a wide field, providing a noncontact and label-free means to assess tissue viability, oxygenation, microarchitecture, and molecular content. We present here openSFDI: an open-source guide for building a low-cost, small-footprint, three-wavelength SFDI system capable of quantifying [Formula: see text] and [Formula: see text] as well as oxyhemoglobin and deoxyhemoglobin concentrations in biological tissue. The companion website provides a complete parts list along with detailed instructions for assembling the openSFDI system. Aim: We describe the design of openSFDI and report on the accuracy and precision of optical property extractions for three different systems fabricated according to the instructions on the openSFDI website. Approach: Accuracy was assessed by measuring nine tissue-simulating optical phantoms with a physiologically relevant range of [Formula: see text] and [Formula: see text] with the openSFDI systems and a commercial SFDI device. Precision was assessed by repeatedly measuring the same phantom over 1 h. Results: The openSFDI systems had an error of [Formula: see text] in [Formula: see text] and [Formula: see text] in [Formula: see text] , compared to a commercial SFDI system. Bland–Altman analysis revealed the limits of agreement between the two systems to be [Formula: see text] for [Formula: see text] and [Formula: see text] to [Formula: see text] for [Formula: see text]. The openSFDI system had low drift with an average standard deviation of [Formula: see text] and [Formula: see text] in [Formula: see text] and [Formula: see text] , respectively. Conclusion: The openSFDI provides a customizable hardware platform for research groups seeking to utilize SFDI for quantitative diffuse optical imaging. Society of Photo-Optical Instrumentation Engineers 2020-01-10 2020-01 /pmc/articles/PMC7008504/ /pubmed/31925946 http://dx.doi.org/10.1117/1.JBO.25.1.016002 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/ Published by SPIE under a Creative Commons Attribution 4.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Imaging Applegate, Matthew B. Karrobi, Kavon Angelo Jr., Joseph P. Austin, Wyatt Tabassum, Syeda M. Aguénounon, Enagnon Tilbury, Karissa Saager, Rolf B. Gioux, Sylvain Roblyer, Darren OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title | OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title_full | OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title_fullStr | OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title_full_unstemmed | OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title_short | OpenSFDI: an open-source guide for constructing a spatial frequency domain imaging system |
title_sort | opensfdi: an open-source guide for constructing a spatial frequency domain imaging system |
topic | Imaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7008504/ https://www.ncbi.nlm.nih.gov/pubmed/31925946 http://dx.doi.org/10.1117/1.JBO.25.1.016002 |
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