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Automated Visual Fin Identification of Individual Great White Sharks

This paper discusses the automated visual identification of individual great white sharks from dorsal fin imagery. We propose a computer vision photo ID system and report recognition results over a database of thousands of unconstrained fin images. To the best of our knowledge this line of work esta...

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Detalles Bibliográficos
Autores principales: Hughes, Benjamin, Burghardt, Tilo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7010395/
https://www.ncbi.nlm.nih.gov/pubmed/32103855
http://dx.doi.org/10.1007/s11263-016-0961-y
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author Hughes, Benjamin
Burghardt, Tilo
author_facet Hughes, Benjamin
Burghardt, Tilo
author_sort Hughes, Benjamin
collection PubMed
description This paper discusses the automated visual identification of individual great white sharks from dorsal fin imagery. We propose a computer vision photo ID system and report recognition results over a database of thousands of unconstrained fin images. To the best of our knowledge this line of work establishes the first fully automated contour-based visual ID system in the field of animal biometrics. The approach put forward appreciates shark fins as textureless, flexible and partially occluded objects with an individually characteristic shape. In order to recover animal identities from an image we first introduce an open contour stroke model, which extends multi-scale region segmentation to achieve robust fin detection. Secondly, we show that combinatorial, scale-space selective fingerprinting can successfully encode fin individuality. We then measure the species-specific distribution of visual individuality along the fin contour via an embedding into a global ‘fin space’. Exploiting this domain, we finally propose a non-linear model for individual animal recognition and combine all approaches into a fine-grained multi-instance framework. We provide a system evaluation, compare results to prior work, and report performance and properties in detail.
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spelling pubmed-70103952020-02-24 Automated Visual Fin Identification of Individual Great White Sharks Hughes, Benjamin Burghardt, Tilo Int J Comput Vis Article This paper discusses the automated visual identification of individual great white sharks from dorsal fin imagery. We propose a computer vision photo ID system and report recognition results over a database of thousands of unconstrained fin images. To the best of our knowledge this line of work establishes the first fully automated contour-based visual ID system in the field of animal biometrics. The approach put forward appreciates shark fins as textureless, flexible and partially occluded objects with an individually characteristic shape. In order to recover animal identities from an image we first introduce an open contour stroke model, which extends multi-scale region segmentation to achieve robust fin detection. Secondly, we show that combinatorial, scale-space selective fingerprinting can successfully encode fin individuality. We then measure the species-specific distribution of visual individuality along the fin contour via an embedding into a global ‘fin space’. Exploiting this domain, we finally propose a non-linear model for individual animal recognition and combine all approaches into a fine-grained multi-instance framework. We provide a system evaluation, compare results to prior work, and report performance and properties in detail. Springer US 2016-10-13 2017 /pmc/articles/PMC7010395/ /pubmed/32103855 http://dx.doi.org/10.1007/s11263-016-0961-y Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Hughes, Benjamin
Burghardt, Tilo
Automated Visual Fin Identification of Individual Great White Sharks
title Automated Visual Fin Identification of Individual Great White Sharks
title_full Automated Visual Fin Identification of Individual Great White Sharks
title_fullStr Automated Visual Fin Identification of Individual Great White Sharks
title_full_unstemmed Automated Visual Fin Identification of Individual Great White Sharks
title_short Automated Visual Fin Identification of Individual Great White Sharks
title_sort automated visual fin identification of individual great white sharks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7010395/
https://www.ncbi.nlm.nih.gov/pubmed/32103855
http://dx.doi.org/10.1007/s11263-016-0961-y
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