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Precision medicine and actionable alterations in lung cancer: A single institution experience

OBJECTIVES: Oncology has become more reliant on new testing methods and a greater use of electronic medical records, which provide a plethora of information available to physicians and researchers. However, to take advantage of vital clinical and research data for precision medicine, we must initial...

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Autores principales: Mambetsariev, Isa, Wang, Yingyu, Chen, Chen, Nadaf, Sorena, Pharaon, Rebecca, Fricke, Jeremy, Amanam, Idoroenyi, Amini, Arya, Bild, Andrea, Chu, Peiguo, Erhunmwunsee, Loretta, Kim, Jae, Munu, Janet, Pillai, Raju, Raz, Dan, Sampath, Sagus, Vora, Lalit, Qiu, Fang, Smith, Lynette, Batra, Surinder K., Massarelli, Erminia, Koczywas, Marianna, Reckamp, Karen, Salgia, Ravi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7012442/
https://www.ncbi.nlm.nih.gov/pubmed/32045431
http://dx.doi.org/10.1371/journal.pone.0228188
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author Mambetsariev, Isa
Wang, Yingyu
Chen, Chen
Nadaf, Sorena
Pharaon, Rebecca
Fricke, Jeremy
Amanam, Idoroenyi
Amini, Arya
Bild, Andrea
Chu, Peiguo
Erhunmwunsee, Loretta
Kim, Jae
Munu, Janet
Pillai, Raju
Raz, Dan
Sampath, Sagus
Vora, Lalit
Qiu, Fang
Smith, Lynette
Batra, Surinder K.
Massarelli, Erminia
Koczywas, Marianna
Reckamp, Karen
Salgia, Ravi
author_facet Mambetsariev, Isa
Wang, Yingyu
Chen, Chen
Nadaf, Sorena
Pharaon, Rebecca
Fricke, Jeremy
Amanam, Idoroenyi
Amini, Arya
Bild, Andrea
Chu, Peiguo
Erhunmwunsee, Loretta
Kim, Jae
Munu, Janet
Pillai, Raju
Raz, Dan
Sampath, Sagus
Vora, Lalit
Qiu, Fang
Smith, Lynette
Batra, Surinder K.
Massarelli, Erminia
Koczywas, Marianna
Reckamp, Karen
Salgia, Ravi
author_sort Mambetsariev, Isa
collection PubMed
description OBJECTIVES: Oncology has become more reliant on new testing methods and a greater use of electronic medical records, which provide a plethora of information available to physicians and researchers. However, to take advantage of vital clinical and research data for precision medicine, we must initially make an effort to create an infrastructure for the collection, storage, and utilization of this information with uniquely designed disease-specific registries that could support the collection of a large number of patients. MATERIALS AND METHODS: In this study, we perform an in-depth analysis of a series of lung adenocarcinoma patients (n = 415) with genomic and clinical data in a recently created thoracic patient registry. RESULTS: Of the 415 patients with lung adenocarcinoma, 59% (n = 245) were female; the median age was 64 (range, 22–92) years with a median OS of 33.29 months (95% CI, 29.77–39.48). The most common actionable alterations were identified in EGFR (n = 177/415 [42.7%]), ALK (n = 28/377 [7.4%]), and BRAF V600E (n = 7/288 [2.4%]). There was also a discernible difference in survival for 222 patients, who had an actionable alteration, with a median OS of 39.8 months as compared to 193 wild-type patients with a median OS of 26.0 months (P<0.001). We identified an unprecedented number of actionable alterations [53.5% (222/415)], including distinct individual alteration rates, as compared with 15.0% and 22.3% in TCGA and GENIE respectively. CONCLUSION: The use of patient registries, focused genomic panels and the appropriate use of clinical guidelines in community and academic settings may influence cohort selection for clinical trials and improve survival outcomes.
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spelling pubmed-70124422020-02-21 Precision medicine and actionable alterations in lung cancer: A single institution experience Mambetsariev, Isa Wang, Yingyu Chen, Chen Nadaf, Sorena Pharaon, Rebecca Fricke, Jeremy Amanam, Idoroenyi Amini, Arya Bild, Andrea Chu, Peiguo Erhunmwunsee, Loretta Kim, Jae Munu, Janet Pillai, Raju Raz, Dan Sampath, Sagus Vora, Lalit Qiu, Fang Smith, Lynette Batra, Surinder K. Massarelli, Erminia Koczywas, Marianna Reckamp, Karen Salgia, Ravi PLoS One Research Article OBJECTIVES: Oncology has become more reliant on new testing methods and a greater use of electronic medical records, which provide a plethora of information available to physicians and researchers. However, to take advantage of vital clinical and research data for precision medicine, we must initially make an effort to create an infrastructure for the collection, storage, and utilization of this information with uniquely designed disease-specific registries that could support the collection of a large number of patients. MATERIALS AND METHODS: In this study, we perform an in-depth analysis of a series of lung adenocarcinoma patients (n = 415) with genomic and clinical data in a recently created thoracic patient registry. RESULTS: Of the 415 patients with lung adenocarcinoma, 59% (n = 245) were female; the median age was 64 (range, 22–92) years with a median OS of 33.29 months (95% CI, 29.77–39.48). The most common actionable alterations were identified in EGFR (n = 177/415 [42.7%]), ALK (n = 28/377 [7.4%]), and BRAF V600E (n = 7/288 [2.4%]). There was also a discernible difference in survival for 222 patients, who had an actionable alteration, with a median OS of 39.8 months as compared to 193 wild-type patients with a median OS of 26.0 months (P<0.001). We identified an unprecedented number of actionable alterations [53.5% (222/415)], including distinct individual alteration rates, as compared with 15.0% and 22.3% in TCGA and GENIE respectively. CONCLUSION: The use of patient registries, focused genomic panels and the appropriate use of clinical guidelines in community and academic settings may influence cohort selection for clinical trials and improve survival outcomes. Public Library of Science 2020-02-11 /pmc/articles/PMC7012442/ /pubmed/32045431 http://dx.doi.org/10.1371/journal.pone.0228188 Text en © 2020 Mambetsariev et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Mambetsariev, Isa
Wang, Yingyu
Chen, Chen
Nadaf, Sorena
Pharaon, Rebecca
Fricke, Jeremy
Amanam, Idoroenyi
Amini, Arya
Bild, Andrea
Chu, Peiguo
Erhunmwunsee, Loretta
Kim, Jae
Munu, Janet
Pillai, Raju
Raz, Dan
Sampath, Sagus
Vora, Lalit
Qiu, Fang
Smith, Lynette
Batra, Surinder K.
Massarelli, Erminia
Koczywas, Marianna
Reckamp, Karen
Salgia, Ravi
Precision medicine and actionable alterations in lung cancer: A single institution experience
title Precision medicine and actionable alterations in lung cancer: A single institution experience
title_full Precision medicine and actionable alterations in lung cancer: A single institution experience
title_fullStr Precision medicine and actionable alterations in lung cancer: A single institution experience
title_full_unstemmed Precision medicine and actionable alterations in lung cancer: A single institution experience
title_short Precision medicine and actionable alterations in lung cancer: A single institution experience
title_sort precision medicine and actionable alterations in lung cancer: a single institution experience
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7012442/
https://www.ncbi.nlm.nih.gov/pubmed/32045431
http://dx.doi.org/10.1371/journal.pone.0228188
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