Cargando…

Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective

We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but...

Descripción completa

Detalles Bibliográficos
Autores principales: Venuto, Marzia Tindara, Decloquement, Mathieu, Martorell Ribera, Joan, Noel, Maxence, Rebl, Alexander, Cogez, Virginie, Petit, Daniel, Galuska, Sebastian Peter, Harduin-Lepers, Anne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014012/
https://www.ncbi.nlm.nih.gov/pubmed/31947579
http://dx.doi.org/10.3390/ijms21020513
_version_ 1783496530787827712
author Venuto, Marzia Tindara
Decloquement, Mathieu
Martorell Ribera, Joan
Noel, Maxence
Rebl, Alexander
Cogez, Virginie
Petit, Daniel
Galuska, Sebastian Peter
Harduin-Lepers, Anne
author_facet Venuto, Marzia Tindara
Decloquement, Mathieu
Martorell Ribera, Joan
Noel, Maxence
Rebl, Alexander
Cogez, Virginie
Petit, Daniel
Galuska, Sebastian Peter
Harduin-Lepers, Anne
author_sort Venuto, Marzia Tindara
collection PubMed
description We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but not by the Teleost-specific R3. We showed that duplicated st8sia genes like st8sia7, st8sia8, and st8sia9 have disappeared from Tetrapods, whereas their orthologues were maintained in Teleosts. Furthermore, several fish species specific genome duplications account for the presence of multiple poly-α2,8-sialyltransferases in the Salmonidae (ST8Sia II-r1 and ST8Sia II-r2) and in Cyprinus carpio (ST8Sia IV-r1 and ST8Sia IV-r2). Paralogy and synteny analyses provided more relevant and solid information that enabled us to reconstruct the evolutionary history of st8sia genes in fish genomes. Our data also indicated that, while the mammalian ST8Sia family is comprised of six subfamilies forming di-, oligo-, or polymers of α2,8-linked sialic acids, the fish ST8Sia family, amounting to a total of 10 genes in fish, appears to be much more diverse and shows a patchy distribution among fish species. A focus on Salmonidae showed that (i) the two copies of st8sia2 genes have overall contrasted tissue-specific expressions, with noticeable changes when compared with human co-orthologue, and that (ii) st8sia4 is weakly expressed. Multiple sequence alignments enabled us to detect changes in the conserved polysialyltransferase domain (PSTD) of the fish sequences that could account for variable enzymatic activities. These data provide the bases for further functional studies using recombinant enzymes.
format Online
Article
Text
id pubmed-7014012
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-70140122020-03-09 Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective Venuto, Marzia Tindara Decloquement, Mathieu Martorell Ribera, Joan Noel, Maxence Rebl, Alexander Cogez, Virginie Petit, Daniel Galuska, Sebastian Peter Harduin-Lepers, Anne Int J Mol Sci Article We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but not by the Teleost-specific R3. We showed that duplicated st8sia genes like st8sia7, st8sia8, and st8sia9 have disappeared from Tetrapods, whereas their orthologues were maintained in Teleosts. Furthermore, several fish species specific genome duplications account for the presence of multiple poly-α2,8-sialyltransferases in the Salmonidae (ST8Sia II-r1 and ST8Sia II-r2) and in Cyprinus carpio (ST8Sia IV-r1 and ST8Sia IV-r2). Paralogy and synteny analyses provided more relevant and solid information that enabled us to reconstruct the evolutionary history of st8sia genes in fish genomes. Our data also indicated that, while the mammalian ST8Sia family is comprised of six subfamilies forming di-, oligo-, or polymers of α2,8-linked sialic acids, the fish ST8Sia family, amounting to a total of 10 genes in fish, appears to be much more diverse and shows a patchy distribution among fish species. A focus on Salmonidae showed that (i) the two copies of st8sia2 genes have overall contrasted tissue-specific expressions, with noticeable changes when compared with human co-orthologue, and that (ii) st8sia4 is weakly expressed. Multiple sequence alignments enabled us to detect changes in the conserved polysialyltransferase domain (PSTD) of the fish sequences that could account for variable enzymatic activities. These data provide the bases for further functional studies using recombinant enzymes. MDPI 2020-01-14 /pmc/articles/PMC7014012/ /pubmed/31947579 http://dx.doi.org/10.3390/ijms21020513 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Venuto, Marzia Tindara
Decloquement, Mathieu
Martorell Ribera, Joan
Noel, Maxence
Rebl, Alexander
Cogez, Virginie
Petit, Daniel
Galuska, Sebastian Peter
Harduin-Lepers, Anne
Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title_full Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title_fullStr Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title_full_unstemmed Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title_short Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
title_sort vertebrate alpha2,8-sialyltransferases (st8sia): a teleost perspective
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014012/
https://www.ncbi.nlm.nih.gov/pubmed/31947579
http://dx.doi.org/10.3390/ijms21020513
work_keys_str_mv AT venutomarziatindara vertebratealpha28sialyltransferasesst8siaateleostperspective
AT decloquementmathieu vertebratealpha28sialyltransferasesst8siaateleostperspective
AT martorellriberajoan vertebratealpha28sialyltransferasesst8siaateleostperspective
AT noelmaxence vertebratealpha28sialyltransferasesst8siaateleostperspective
AT reblalexander vertebratealpha28sialyltransferasesst8siaateleostperspective
AT cogezvirginie vertebratealpha28sialyltransferasesst8siaateleostperspective
AT petitdaniel vertebratealpha28sialyltransferasesst8siaateleostperspective
AT galuskasebastianpeter vertebratealpha28sialyltransferasesst8siaateleostperspective
AT harduinlepersanne vertebratealpha28sialyltransferasesst8siaateleostperspective