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Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective
We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014012/ https://www.ncbi.nlm.nih.gov/pubmed/31947579 http://dx.doi.org/10.3390/ijms21020513 |
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author | Venuto, Marzia Tindara Decloquement, Mathieu Martorell Ribera, Joan Noel, Maxence Rebl, Alexander Cogez, Virginie Petit, Daniel Galuska, Sebastian Peter Harduin-Lepers, Anne |
author_facet | Venuto, Marzia Tindara Decloquement, Mathieu Martorell Ribera, Joan Noel, Maxence Rebl, Alexander Cogez, Virginie Petit, Daniel Galuska, Sebastian Peter Harduin-Lepers, Anne |
author_sort | Venuto, Marzia Tindara |
collection | PubMed |
description | We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but not by the Teleost-specific R3. We showed that duplicated st8sia genes like st8sia7, st8sia8, and st8sia9 have disappeared from Tetrapods, whereas their orthologues were maintained in Teleosts. Furthermore, several fish species specific genome duplications account for the presence of multiple poly-α2,8-sialyltransferases in the Salmonidae (ST8Sia II-r1 and ST8Sia II-r2) and in Cyprinus carpio (ST8Sia IV-r1 and ST8Sia IV-r2). Paralogy and synteny analyses provided more relevant and solid information that enabled us to reconstruct the evolutionary history of st8sia genes in fish genomes. Our data also indicated that, while the mammalian ST8Sia family is comprised of six subfamilies forming di-, oligo-, or polymers of α2,8-linked sialic acids, the fish ST8Sia family, amounting to a total of 10 genes in fish, appears to be much more diverse and shows a patchy distribution among fish species. A focus on Salmonidae showed that (i) the two copies of st8sia2 genes have overall contrasted tissue-specific expressions, with noticeable changes when compared with human co-orthologue, and that (ii) st8sia4 is weakly expressed. Multiple sequence alignments enabled us to detect changes in the conserved polysialyltransferase domain (PSTD) of the fish sequences that could account for variable enzymatic activities. These data provide the bases for further functional studies using recombinant enzymes. |
format | Online Article Text |
id | pubmed-7014012 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70140122020-03-09 Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective Venuto, Marzia Tindara Decloquement, Mathieu Martorell Ribera, Joan Noel, Maxence Rebl, Alexander Cogez, Virginie Petit, Daniel Galuska, Sebastian Peter Harduin-Lepers, Anne Int J Mol Sci Article We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but not by the Teleost-specific R3. We showed that duplicated st8sia genes like st8sia7, st8sia8, and st8sia9 have disappeared from Tetrapods, whereas their orthologues were maintained in Teleosts. Furthermore, several fish species specific genome duplications account for the presence of multiple poly-α2,8-sialyltransferases in the Salmonidae (ST8Sia II-r1 and ST8Sia II-r2) and in Cyprinus carpio (ST8Sia IV-r1 and ST8Sia IV-r2). Paralogy and synteny analyses provided more relevant and solid information that enabled us to reconstruct the evolutionary history of st8sia genes in fish genomes. Our data also indicated that, while the mammalian ST8Sia family is comprised of six subfamilies forming di-, oligo-, or polymers of α2,8-linked sialic acids, the fish ST8Sia family, amounting to a total of 10 genes in fish, appears to be much more diverse and shows a patchy distribution among fish species. A focus on Salmonidae showed that (i) the two copies of st8sia2 genes have overall contrasted tissue-specific expressions, with noticeable changes when compared with human co-orthologue, and that (ii) st8sia4 is weakly expressed. Multiple sequence alignments enabled us to detect changes in the conserved polysialyltransferase domain (PSTD) of the fish sequences that could account for variable enzymatic activities. These data provide the bases for further functional studies using recombinant enzymes. MDPI 2020-01-14 /pmc/articles/PMC7014012/ /pubmed/31947579 http://dx.doi.org/10.3390/ijms21020513 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Venuto, Marzia Tindara Decloquement, Mathieu Martorell Ribera, Joan Noel, Maxence Rebl, Alexander Cogez, Virginie Petit, Daniel Galuska, Sebastian Peter Harduin-Lepers, Anne Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title | Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title_full | Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title_fullStr | Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title_full_unstemmed | Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title_short | Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective |
title_sort | vertebrate alpha2,8-sialyltransferases (st8sia): a teleost perspective |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014012/ https://www.ncbi.nlm.nih.gov/pubmed/31947579 http://dx.doi.org/10.3390/ijms21020513 |
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