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A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Instituto de Medicina Tropical
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014565/ https://www.ncbi.nlm.nih.gov/pubmed/32049260 http://dx.doi.org/10.1590/S1678-9946202062009 |
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author | Busser, Felipe Delatorre Coelho, Vivian Caso Fonseca, Claudia de Abreu Del Negro, Gilda Maria Barbaro Shikanai-Yasuda, Maria Aparecida Lopes, Marta Heloisa Magri, Marcello Mihailenko Chaves de Freitas, Vera Lucia Teixeira |
author_facet | Busser, Felipe Delatorre Coelho, Vivian Caso Fonseca, Claudia de Abreu Del Negro, Gilda Maria Barbaro Shikanai-Yasuda, Maria Aparecida Lopes, Marta Heloisa Magri, Marcello Mihailenko Chaves de Freitas, Vera Lucia Teixeira |
author_sort | Busser, Felipe Delatorre |
collection | PubMed |
description | Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing C. albicans , spiked human blood, the cloned qPCR target fragment (ITS2 region) and the results of these assays were compared. The assays showed a good detection limit: C. albicans DNA extracted from yeast (sensitivity 0.2 CFU/µL), spiked human blood (sensitivity 10 CFU/mL), and cloned fragment of ITS2 region (sensitivity 20 target copies/μL). The efficiency of ITS2 fragment-qPCR ranged from 89.67 to 97.07, and the linearity (R(2)) of the standard curve ranged from 0.992 to 0.999. The results showed that this ITS2-qPCR has a great potential as a molecular prototype model for the development of a test to be applied in clinical practice, greatly reducing the time of candidemia diagnosis, which is extremely important in this clinical setting. |
format | Online Article Text |
id | pubmed-7014565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Instituto de Medicina Tropical |
record_format | MEDLINE/PubMed |
spelling | pubmed-70145652020-02-24 A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood Busser, Felipe Delatorre Coelho, Vivian Caso Fonseca, Claudia de Abreu Del Negro, Gilda Maria Barbaro Shikanai-Yasuda, Maria Aparecida Lopes, Marta Heloisa Magri, Marcello Mihailenko Chaves de Freitas, Vera Lucia Teixeira Rev Inst Med Trop Sao Paulo Brief Communication Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing C. albicans , spiked human blood, the cloned qPCR target fragment (ITS2 region) and the results of these assays were compared. The assays showed a good detection limit: C. albicans DNA extracted from yeast (sensitivity 0.2 CFU/µL), spiked human blood (sensitivity 10 CFU/mL), and cloned fragment of ITS2 region (sensitivity 20 target copies/μL). The efficiency of ITS2 fragment-qPCR ranged from 89.67 to 97.07, and the linearity (R(2)) of the standard curve ranged from 0.992 to 0.999. The results showed that this ITS2-qPCR has a great potential as a molecular prototype model for the development of a test to be applied in clinical practice, greatly reducing the time of candidemia diagnosis, which is extremely important in this clinical setting. Instituto de Medicina Tropical 2020-02-07 /pmc/articles/PMC7014565/ /pubmed/32049260 http://dx.doi.org/10.1590/S1678-9946202062009 Text en https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Brief Communication Busser, Felipe Delatorre Coelho, Vivian Caso Fonseca, Claudia de Abreu Del Negro, Gilda Maria Barbaro Shikanai-Yasuda, Maria Aparecida Lopes, Marta Heloisa Magri, Marcello Mihailenko Chaves de Freitas, Vera Lucia Teixeira A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title | A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title_full | A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title_fullStr | A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title_full_unstemmed | A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title_short | A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood |
title_sort | real time pcr strategy for the detection and quantification of candida albicans in human blood |
topic | Brief Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014565/ https://www.ncbi.nlm.nih.gov/pubmed/32049260 http://dx.doi.org/10.1590/S1678-9946202062009 |
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