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A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood

Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing...

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Autores principales: Busser, Felipe Delatorre, Coelho, Vivian Caso, Fonseca, Claudia de Abreu, Del Negro, Gilda Maria Barbaro, Shikanai-Yasuda, Maria Aparecida, Lopes, Marta Heloisa, Magri, Marcello Mihailenko Chaves, de Freitas, Vera Lucia Teixeira
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Instituto de Medicina Tropical 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014565/
https://www.ncbi.nlm.nih.gov/pubmed/32049260
http://dx.doi.org/10.1590/S1678-9946202062009
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author Busser, Felipe Delatorre
Coelho, Vivian Caso
Fonseca, Claudia de Abreu
Del Negro, Gilda Maria Barbaro
Shikanai-Yasuda, Maria Aparecida
Lopes, Marta Heloisa
Magri, Marcello Mihailenko Chaves
de Freitas, Vera Lucia Teixeira
author_facet Busser, Felipe Delatorre
Coelho, Vivian Caso
Fonseca, Claudia de Abreu
Del Negro, Gilda Maria Barbaro
Shikanai-Yasuda, Maria Aparecida
Lopes, Marta Heloisa
Magri, Marcello Mihailenko Chaves
de Freitas, Vera Lucia Teixeira
author_sort Busser, Felipe Delatorre
collection PubMed
description Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing C. albicans , spiked human blood, the cloned qPCR target fragment (ITS2 region) and the results of these assays were compared. The assays showed a good detection limit: C. albicans DNA extracted from yeast (sensitivity 0.2 CFU/µL), spiked human blood (sensitivity 10 CFU/mL), and cloned fragment of ITS2 region (sensitivity 20 target copies/μL). The efficiency of ITS2 fragment-qPCR ranged from 89.67 to 97.07, and the linearity (R(2)) of the standard curve ranged from 0.992 to 0.999. The results showed that this ITS2-qPCR has a great potential as a molecular prototype model for the development of a test to be applied in clinical practice, greatly reducing the time of candidemia diagnosis, which is extremely important in this clinical setting.
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spelling pubmed-70145652020-02-24 A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood Busser, Felipe Delatorre Coelho, Vivian Caso Fonseca, Claudia de Abreu Del Negro, Gilda Maria Barbaro Shikanai-Yasuda, Maria Aparecida Lopes, Marta Heloisa Magri, Marcello Mihailenko Chaves de Freitas, Vera Lucia Teixeira Rev Inst Med Trop Sao Paulo Brief Communication Candidemia is a significant cause of bloodstream infections (BSI) in nosocomial settings. The identification of species can potentially improve the quality of care and decrease human mortality. Quantitative PCR (qPCR) was evaluated for Candida albicans detection using culture suspensions containing C. albicans , spiked human blood, the cloned qPCR target fragment (ITS2 region) and the results of these assays were compared. The assays showed a good detection limit: C. albicans DNA extracted from yeast (sensitivity 0.2 CFU/µL), spiked human blood (sensitivity 10 CFU/mL), and cloned fragment of ITS2 region (sensitivity 20 target copies/μL). The efficiency of ITS2 fragment-qPCR ranged from 89.67 to 97.07, and the linearity (R(2)) of the standard curve ranged from 0.992 to 0.999. The results showed that this ITS2-qPCR has a great potential as a molecular prototype model for the development of a test to be applied in clinical practice, greatly reducing the time of candidemia diagnosis, which is extremely important in this clinical setting. Instituto de Medicina Tropical 2020-02-07 /pmc/articles/PMC7014565/ /pubmed/32049260 http://dx.doi.org/10.1590/S1678-9946202062009 Text en https://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Communication
Busser, Felipe Delatorre
Coelho, Vivian Caso
Fonseca, Claudia de Abreu
Del Negro, Gilda Maria Barbaro
Shikanai-Yasuda, Maria Aparecida
Lopes, Marta Heloisa
Magri, Marcello Mihailenko Chaves
de Freitas, Vera Lucia Teixeira
A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title_full A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title_fullStr A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title_full_unstemmed A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title_short A Real Time PCR strategy for the detection and quantification of Candida albicans in human blood
title_sort real time pcr strategy for the detection and quantification of candida albicans in human blood
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014565/
https://www.ncbi.nlm.nih.gov/pubmed/32049260
http://dx.doi.org/10.1590/S1678-9946202062009
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