Cargando…

A fast-linear mixed model for genome-wide haplotype association analysis: application to agronomic traits in maize

BACKGROUND: Haplotypes combine the effects of several single nucleotide polymorphisms (SNPs) with high linkage disequilibrium, which benefit the genome-wide association analysis (GWAS). In the haplotype association analysis, both haplotype alleles and blocks are tested. Haplotype alleles can be infe...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chen, Heli, Hao, Zhiyu, Zhao, Yunfeng, Yang, Runqing
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2020
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7014697/ https://www.ncbi.nlm.nih.gov/pubmed/32046650 http://dx.doi.org/10.1186/s12864-020-6552-x

Ejemplares similares

Gene-Based Genome-Wide Association Study Identified Genes for Agronomic Traits in Maize
por: Zhao, Yunfeng, et al.
Publicado: (2022)

Genome wide association analysis for yield related traits in maize
por: Zeng, Tingru, et al.
Publicado: (2022)

Genome-wide hierarchical mixed model association analysis
por: Hao, Zhiyu, et al.
Publicado: (2021)

A Genome-Wide Association Study for Agronomic Traits in Soybean Using SNP Markers and SNP-Based Haplotype Analysis
por: Contreras-Soto, Rodrigo Iván, et al.
Publicado: (2017)

Genome Wide Association Study for Drought, Aflatoxin Resistance, and Important Agronomic Traits of Maize Hybrids in the Sub-Tropics
por: Farfan, Ivan D. Barrero, et al.
Publicado: (2015)

The haplotype-resolved T2T reference genome highlights structural variation underlying agronomic traits of melon
por: Li, Guoli, et al.
Publicado: (2023)

Genome-wide association study of 12 agronomic traits in peach
por: Cao, Ke, et al.
Publicado: (2016)

Fast and flexible linear mixed models for genome-wide genetics
por: Runcie, Daniel E., et al.
Publicado: (2019)

Complex genetic architecture underlying the plasticity of maize agronomic traits
por: Jin, Minliang, et al.
Publicado: (2023)

Genome Reduction in Tetraploid Potato Reveals Genetic Load, Haplotype Variation, and Loci Associated With Agronomic Traits
por: Manrique-Carpintero, Norma C., et al.
Publicado: (2018)

The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng
por: Fan, Guangyi, et al.
Publicado: (2020)

Genetic analysis of seedling root traits reveals the association of root trait with other agronomic traits in maize
por: Ju, Chuanli, et al.
Publicado: (2018)

Comparative and parallel genome-wide association studies for metabolic and agronomic traits in cereals
por: Chen, Wei, et al.
Publicado: (2016)

Genome-Wide Association Study of Major Agronomic Traits Related to Domestication in Peanut
por: Zhang, Xingguo, et al.
Publicado: (2017)

Genome-wide association study of agronomic traits in rice cultivated in temperate regions
por: Reig-Valiente, Juan L, et al.
Publicado: (2018)

Genome-wide association studies for agronomical traits in a world wide spring barley collection
por: Pasam, Raj K, et al.
Publicado: (2012)

Genome-wide association studies dissect the genetic networks underlying agronomical traits in soybean
por: Fang, Chao, et al.
Publicado: (2017)

Effects of Basal Selenium Fertilizer Application on Agronomic Traits, Yield, Quality, and Se Content of Dryland Maize
por: Wang, Le, et al.
Publicado: (2022)

Discovery of beneficial haplotypes for complex traits in maize landraces
por: Mayer, Manfred, et al.
Publicado: (2020)

Role of heterotrimeric Gα proteins in maize development and enhancement of agronomic traits
por: Wu, Qingyu, et al.
Publicado: (2018)

Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize
por: Ramstein, Guillaume P., et al.
Publicado: (2020)

Combining Ability and Heterosis for Endosperm Carotenoids and Agronomic Traits in Tropical Maize Lines
por: Azmach, Girum, et al.
Publicado: (2021)

Genetic Diversity of Transcription Factor Genes in Triticum and Mining for Promising Haplotypes for Beneficial Agronomic Traits
por: Yang, Guang, et al.
Publicado: (2022)

A fast algorithm for genome-wide haplotype pattern mining
por: Besenbacher, Søren, et al.
Publicado: (2009)

Agronomic and Seed Quality Traits Dissected by Genome-Wide Association Mapping in Brassica napus
por: Körber, Niklas, et al.
Publicado: (2016)

Genome-Wide Association Studies of 11 Agronomic Traits in Cassava (Manihot esculenta Crantz)
por: Zhang, Shengkui, et al.
Publicado: (2018)

A Genome-Wide Association Study of Highly Heritable Agronomic Traits in Durum Wheat
por: Wang, Shubin, et al.
Publicado: (2019)

Multi-Locus Genome-Wide Association Studies for 14 Main Agronomic Traits in Barley
por: Hu, Xin, et al.
Publicado: (2018)

Genome wide association study of 5 agronomic traits in olive (Olea europaea L.)
por: Kaya, Hilal Betul, et al.
Publicado: (2019)

Genome-Wide Association Study of Agronomic and Physiological Traits Related to Drought Tolerance in Potato
por: Alvarez-Morezuelas, Alba, et al.
Publicado: (2023)

Genome-wide association analyses of agronomic traits and Striga hermonthica resistance in pearl millet
por: Rouamba, Armel, et al.
Publicado: (2023)

Genome Wide Association Studies Using a New Nonparametric Model Reveal the Genetic Architecture of 17 Agronomic Traits in an Enlarged Maize Association Panel
por: Yang, Ning, et al.
Publicado: (2014)

Genomic insights into citrus domestication and its important agronomic traits
por: Rao, Muhammad Junaid, et al.
Publicado: (2020)

Multiple-statistical genome-wide association analysis and genomic prediction of fruit aroma and agronomic traits in peaches
por: Li, Xiongwei, et al.
Publicado: (2023)

Genome-wide association studies for phenological and agronomic traits in mungbean (Vigna radiata L. Wilczek)
por: Manjunatha, P. B., et al.
Publicado: (2023)

Genetic diversity and genome-wide association study of 13 agronomic traits in 977 Beta vulgaris L. germplasms
por: Liu, Dali, et al.
Publicado: (2023)

Identification of TaPPH-7A haplotypes and development of a molecular marker associated with important agronomic traits in common wheat
por: Wang, Huiyan, et al.
Publicado: (2019)

DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits
por: Haseneyer, Grit, et al.
Publicado: (2010)

Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis
por: Canal, Guilherme Bravim, et al.
Publicado: (2023)

The maize leaf lipidome shows multilevel genetic control and high predictive value for agronomic traits
por: Riedelsheimer, Christian, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_q0dc4lkedov33vmsnl4bs6t79a