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A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7017310/ https://www.ncbi.nlm.nih.gov/pubmed/31861273 http://dx.doi.org/10.3390/cancers12010001 |
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author | Shi, Run Bao, Xuanwen Weischenfeldt, Joachim Schaefer, Christian Rogowski, Paul Schmidt-Hegemann, Nina-Sophie Unger, Kristian Lauber, Kirsten Wang, Xuanbin Buchner, Alexander Stief, Christian Schlomm, Thorsten Belka, Claus Li, Minglun |
author_facet | Shi, Run Bao, Xuanwen Weischenfeldt, Joachim Schaefer, Christian Rogowski, Paul Schmidt-Hegemann, Nina-Sophie Unger, Kristian Lauber, Kirsten Wang, Xuanbin Buchner, Alexander Stief, Christian Schlomm, Thorsten Belka, Claus Li, Minglun |
author_sort | Shi, Run |
collection | PubMed |
description | Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and guide clinical decision-making for postoperative therapy. Using high-throughput screening and least absolute shrinkage and selection operator (LASSO) in the training set, a novel gene signature for biochemical recurrence-free survival (BCRFS) was established. Validation of the prognostic value was performed in five other independent datasets, including our patient cohort. Multivariate Cox regression analysis was performed to evaluate the importance of risk for BCR. Time-dependent receiver operating characteristic (tROC) was used to evaluate the predictive power. In combination with relevant clinicopathological features, a decision tree was built to improve the risk stratification. The gene signature exhibited a strong capacity for identifying high-risk BCR patients, and multivariate Cox regression analysis demonstrated that the gene signature consistently acted as a risk factor for BCR. The decision tree was successfully able to identify the high-risk subgroup. Overall, the gene signature established in the present study is a powerful predictor and risk factor for BCR after radical prostatectomy. |
format | Online Article Text |
id | pubmed-7017310 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-70173102020-02-28 A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy Shi, Run Bao, Xuanwen Weischenfeldt, Joachim Schaefer, Christian Rogowski, Paul Schmidt-Hegemann, Nina-Sophie Unger, Kristian Lauber, Kirsten Wang, Xuanbin Buchner, Alexander Stief, Christian Schlomm, Thorsten Belka, Claus Li, Minglun Cancers (Basel) Article Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and guide clinical decision-making for postoperative therapy. Using high-throughput screening and least absolute shrinkage and selection operator (LASSO) in the training set, a novel gene signature for biochemical recurrence-free survival (BCRFS) was established. Validation of the prognostic value was performed in five other independent datasets, including our patient cohort. Multivariate Cox regression analysis was performed to evaluate the importance of risk for BCR. Time-dependent receiver operating characteristic (tROC) was used to evaluate the predictive power. In combination with relevant clinicopathological features, a decision tree was built to improve the risk stratification. The gene signature exhibited a strong capacity for identifying high-risk BCR patients, and multivariate Cox regression analysis demonstrated that the gene signature consistently acted as a risk factor for BCR. The decision tree was successfully able to identify the high-risk subgroup. Overall, the gene signature established in the present study is a powerful predictor and risk factor for BCR after radical prostatectomy. MDPI 2019-12-18 /pmc/articles/PMC7017310/ /pubmed/31861273 http://dx.doi.org/10.3390/cancers12010001 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Shi, Run Bao, Xuanwen Weischenfeldt, Joachim Schaefer, Christian Rogowski, Paul Schmidt-Hegemann, Nina-Sophie Unger, Kristian Lauber, Kirsten Wang, Xuanbin Buchner, Alexander Stief, Christian Schlomm, Thorsten Belka, Claus Li, Minglun A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title | A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title_full | A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title_fullStr | A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title_full_unstemmed | A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title_short | A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy |
title_sort | novel gene signature-based model predicts biochemical recurrence-free survival in prostate cancer patients after radical prostatectomy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7017310/ https://www.ncbi.nlm.nih.gov/pubmed/31861273 http://dx.doi.org/10.3390/cancers12010001 |
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