Cargando…

A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy

Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Run, Bao, Xuanwen, Weischenfeldt, Joachim, Schaefer, Christian, Rogowski, Paul, Schmidt-Hegemann, Nina-Sophie, Unger, Kristian, Lauber, Kirsten, Wang, Xuanbin, Buchner, Alexander, Stief, Christian, Schlomm, Thorsten, Belka, Claus, Li, Minglun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7017310/
https://www.ncbi.nlm.nih.gov/pubmed/31861273
http://dx.doi.org/10.3390/cancers12010001
_version_ 1783497172381073408
author Shi, Run
Bao, Xuanwen
Weischenfeldt, Joachim
Schaefer, Christian
Rogowski, Paul
Schmidt-Hegemann, Nina-Sophie
Unger, Kristian
Lauber, Kirsten
Wang, Xuanbin
Buchner, Alexander
Stief, Christian
Schlomm, Thorsten
Belka, Claus
Li, Minglun
author_facet Shi, Run
Bao, Xuanwen
Weischenfeldt, Joachim
Schaefer, Christian
Rogowski, Paul
Schmidt-Hegemann, Nina-Sophie
Unger, Kristian
Lauber, Kirsten
Wang, Xuanbin
Buchner, Alexander
Stief, Christian
Schlomm, Thorsten
Belka, Claus
Li, Minglun
author_sort Shi, Run
collection PubMed
description Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and guide clinical decision-making for postoperative therapy. Using high-throughput screening and least absolute shrinkage and selection operator (LASSO) in the training set, a novel gene signature for biochemical recurrence-free survival (BCRFS) was established. Validation of the prognostic value was performed in five other independent datasets, including our patient cohort. Multivariate Cox regression analysis was performed to evaluate the importance of risk for BCR. Time-dependent receiver operating characteristic (tROC) was used to evaluate the predictive power. In combination with relevant clinicopathological features, a decision tree was built to improve the risk stratification. The gene signature exhibited a strong capacity for identifying high-risk BCR patients, and multivariate Cox regression analysis demonstrated that the gene signature consistently acted as a risk factor for BCR. The decision tree was successfully able to identify the high-risk subgroup. Overall, the gene signature established in the present study is a powerful predictor and risk factor for BCR after radical prostatectomy.
format Online
Article
Text
id pubmed-7017310
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-70173102020-02-28 A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy Shi, Run Bao, Xuanwen Weischenfeldt, Joachim Schaefer, Christian Rogowski, Paul Schmidt-Hegemann, Nina-Sophie Unger, Kristian Lauber, Kirsten Wang, Xuanbin Buchner, Alexander Stief, Christian Schlomm, Thorsten Belka, Claus Li, Minglun Cancers (Basel) Article Currently, decision-making regarding biochemical recurrence (BCR) following prostatectomy relies solely on clinical parameters. We therefore attempted to develop an integrated prediction model based on a molecular signature and clinicopathological features, in order to forecast the risk for BCR and guide clinical decision-making for postoperative therapy. Using high-throughput screening and least absolute shrinkage and selection operator (LASSO) in the training set, a novel gene signature for biochemical recurrence-free survival (BCRFS) was established. Validation of the prognostic value was performed in five other independent datasets, including our patient cohort. Multivariate Cox regression analysis was performed to evaluate the importance of risk for BCR. Time-dependent receiver operating characteristic (tROC) was used to evaluate the predictive power. In combination with relevant clinicopathological features, a decision tree was built to improve the risk stratification. The gene signature exhibited a strong capacity for identifying high-risk BCR patients, and multivariate Cox regression analysis demonstrated that the gene signature consistently acted as a risk factor for BCR. The decision tree was successfully able to identify the high-risk subgroup. Overall, the gene signature established in the present study is a powerful predictor and risk factor for BCR after radical prostatectomy. MDPI 2019-12-18 /pmc/articles/PMC7017310/ /pubmed/31861273 http://dx.doi.org/10.3390/cancers12010001 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shi, Run
Bao, Xuanwen
Weischenfeldt, Joachim
Schaefer, Christian
Rogowski, Paul
Schmidt-Hegemann, Nina-Sophie
Unger, Kristian
Lauber, Kirsten
Wang, Xuanbin
Buchner, Alexander
Stief, Christian
Schlomm, Thorsten
Belka, Claus
Li, Minglun
A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title_full A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title_fullStr A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title_full_unstemmed A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title_short A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
title_sort novel gene signature-based model predicts biochemical recurrence-free survival in prostate cancer patients after radical prostatectomy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7017310/
https://www.ncbi.nlm.nih.gov/pubmed/31861273
http://dx.doi.org/10.3390/cancers12010001
work_keys_str_mv AT shirun anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT baoxuanwen anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT weischenfeldtjoachim anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schaeferchristian anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT rogowskipaul anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schmidthegemannninasophie anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT ungerkristian anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT lauberkirsten anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT wangxuanbin anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT buchneralexander anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT stiefchristian anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schlommthorsten anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT belkaclaus anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT liminglun anovelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT shirun novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT baoxuanwen novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT weischenfeldtjoachim novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schaeferchristian novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT rogowskipaul novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schmidthegemannninasophie novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT ungerkristian novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT lauberkirsten novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT wangxuanbin novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT buchneralexander novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT stiefchristian novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT schlommthorsten novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT belkaclaus novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy
AT liminglun novelgenesignaturebasedmodelpredictsbiochemicalrecurrencefreesurvivalinprostatecancerpatientsafterradicalprostatectomy