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Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma
PURPOSE: To evaluate whether if ultrasonography (US)-based radiomics enables prediction of the presence of BRAF(V600E) mutations among patients diagnosed as papillary thyroid carcninoma (PTC). METHODS: From December 2015 to May 2017, 527 patients who had been treated surgically for PTC were included...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018006/ https://www.ncbi.nlm.nih.gov/pubmed/32053670 http://dx.doi.org/10.1371/journal.pone.0228968 |
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author | Yoon, Jung Hyun Han, Kyunghwa Lee, Eunjung Lee, Jandee Kim, Eun-Kyung Moon, Hee Jung Park, Vivian Youngjean Nam, Kee Hyun Kwak, Jin Young |
author_facet | Yoon, Jung Hyun Han, Kyunghwa Lee, Eunjung Lee, Jandee Kim, Eun-Kyung Moon, Hee Jung Park, Vivian Youngjean Nam, Kee Hyun Kwak, Jin Young |
author_sort | Yoon, Jung Hyun |
collection | PubMed |
description | PURPOSE: To evaluate whether if ultrasonography (US)-based radiomics enables prediction of the presence of BRAF(V600E) mutations among patients diagnosed as papillary thyroid carcninoma (PTC). METHODS: From December 2015 to May 2017, 527 patients who had been treated surgically for PTC were included (training: 387, validation: 140). All patients had BRAF(V600E) mutation analysis performed on surgical specimen. Feature extraction was performed using preoperative US images of the 527 patients (mean size of PTC: 16.4mm±7.9, range, 10–85 mm). A Radiomics Score was generated by using the least absolute shrinkage and selection operator (LASSO) regression model. Univariable/multivariable logistic regression analysis was performed to evaluate the factors including Radiomics Score in predicting BRAF(V600E) mutation. Subgroup analysis including conventional PTC <20-mm (n = 389) was performed (training: 280, validation: 109). RESULTS: Of the 527 patients diagnosed with PTC, 428 (81.2%) were positive and 99 (18.8%) were negative for BRAF(V600E) mutation. In both total 527 cancers and 389 conventional PTC<20-mm, Radiomics Score was the single factor showing significant association to the presence of BRAF(V600E) mutation on multivariable analysis (all P<0.05). C-statistics for the validation set in the total cancers and the conventional PTCs<20-mm were lower than that of the training set: 0.629 (95% CI: 0.516–0.742) to 0.718 (95% CI: 0.650–0.786), and 0.567 (95% CI: 0.434–0.699) to 0.729 (95% CI: 0.632–0.826), respectively. CONCLUSION: Radiomics features extracted from US has limited value as a non-invasive biomarker for predicting the presence of BRAF(V600E) mutation status of PTC regardless of size. |
format | Online Article Text |
id | pubmed-7018006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-70180062020-02-26 Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma Yoon, Jung Hyun Han, Kyunghwa Lee, Eunjung Lee, Jandee Kim, Eun-Kyung Moon, Hee Jung Park, Vivian Youngjean Nam, Kee Hyun Kwak, Jin Young PLoS One Research Article PURPOSE: To evaluate whether if ultrasonography (US)-based radiomics enables prediction of the presence of BRAF(V600E) mutations among patients diagnosed as papillary thyroid carcninoma (PTC). METHODS: From December 2015 to May 2017, 527 patients who had been treated surgically for PTC were included (training: 387, validation: 140). All patients had BRAF(V600E) mutation analysis performed on surgical specimen. Feature extraction was performed using preoperative US images of the 527 patients (mean size of PTC: 16.4mm±7.9, range, 10–85 mm). A Radiomics Score was generated by using the least absolute shrinkage and selection operator (LASSO) regression model. Univariable/multivariable logistic regression analysis was performed to evaluate the factors including Radiomics Score in predicting BRAF(V600E) mutation. Subgroup analysis including conventional PTC <20-mm (n = 389) was performed (training: 280, validation: 109). RESULTS: Of the 527 patients diagnosed with PTC, 428 (81.2%) were positive and 99 (18.8%) were negative for BRAF(V600E) mutation. In both total 527 cancers and 389 conventional PTC<20-mm, Radiomics Score was the single factor showing significant association to the presence of BRAF(V600E) mutation on multivariable analysis (all P<0.05). C-statistics for the validation set in the total cancers and the conventional PTCs<20-mm were lower than that of the training set: 0.629 (95% CI: 0.516–0.742) to 0.718 (95% CI: 0.650–0.786), and 0.567 (95% CI: 0.434–0.699) to 0.729 (95% CI: 0.632–0.826), respectively. CONCLUSION: Radiomics features extracted from US has limited value as a non-invasive biomarker for predicting the presence of BRAF(V600E) mutation status of PTC regardless of size. Public Library of Science 2020-02-13 /pmc/articles/PMC7018006/ /pubmed/32053670 http://dx.doi.org/10.1371/journal.pone.0228968 Text en © 2020 Yoon et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Yoon, Jung Hyun Han, Kyunghwa Lee, Eunjung Lee, Jandee Kim, Eun-Kyung Moon, Hee Jung Park, Vivian Youngjean Nam, Kee Hyun Kwak, Jin Young Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title | Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title_full | Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title_fullStr | Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title_full_unstemmed | Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title_short | Radiomics in predicting mutation status for thyroid cancer: A preliminary study using radiomics features for predicting BRAF(V600E) mutations in papillary thyroid carcinoma |
title_sort | radiomics in predicting mutation status for thyroid cancer: a preliminary study using radiomics features for predicting braf(v600e) mutations in papillary thyroid carcinoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018006/ https://www.ncbi.nlm.nih.gov/pubmed/32053670 http://dx.doi.org/10.1371/journal.pone.0228968 |
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