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Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients

Radiogenomics is a new field that provides clinically useful prognostic predictions by linking molecular characteristics such as the genetic aberrations of malignant tumors with medical images. The abnormal expression of serum microRNA-1246 (miR-1246) has been reported as a prognostic factor of esop...

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Autores principales: Hoshino, Isamu, Yokota, Hajime, Ishige, Fumitaka, Iwatate, Yosuke, Takeshita, Nobuyoshi, Nagase, Hiroki, Uno, Takashi, Matsubara, Hisahiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018689/
https://www.ncbi.nlm.nih.gov/pubmed/32054931
http://dx.doi.org/10.1038/s41598-020-59500-7
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author Hoshino, Isamu
Yokota, Hajime
Ishige, Fumitaka
Iwatate, Yosuke
Takeshita, Nobuyoshi
Nagase, Hiroki
Uno, Takashi
Matsubara, Hisahiro
author_facet Hoshino, Isamu
Yokota, Hajime
Ishige, Fumitaka
Iwatate, Yosuke
Takeshita, Nobuyoshi
Nagase, Hiroki
Uno, Takashi
Matsubara, Hisahiro
author_sort Hoshino, Isamu
collection PubMed
description Radiogenomics is a new field that provides clinically useful prognostic predictions by linking molecular characteristics such as the genetic aberrations of malignant tumors with medical images. The abnormal expression of serum microRNA-1246 (miR-1246) has been reported as a prognostic factor of esophageal squamous cell carcinoma (ESCC). To evaluate the power of the miR-1246 level predicted with radiogenomics techniques as a predictor of the prognosis of ESCC patients. The real miR-1246 expression (miR-1246(real)) was measured in 92 ESCC patients. Forty-five image features (IFs) were extracted from tumor regions on contrast-enhanced computed tomography. A prediction model for miR-1246(real) was constructed using linear regression with selected features identified in a correlation analysis of miR-1246(real) and each IF. A threshold to divide the patients into two groups was defined according to a receiver operating characteristic analysis for miR-1246(real). Survival analyses were performed between two groups. Six IFs were correlated with miR-1246(real) and were included in the prediction model. The survival curves of high and low groups of miR-1246(real) and miR-1246(pred) showed significant differences (p = 0.001 and 0.016). Both miR-1246(real) and miR-1246(pred) were independent predictors of overall survival (p = 0.030 and 0.035). miR-1246(pred) produced by radiogenomics had similar power to miR-1246(real) for predicting the prognosis of ESCC.
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spelling pubmed-70186892020-02-21 Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients Hoshino, Isamu Yokota, Hajime Ishige, Fumitaka Iwatate, Yosuke Takeshita, Nobuyoshi Nagase, Hiroki Uno, Takashi Matsubara, Hisahiro Sci Rep Article Radiogenomics is a new field that provides clinically useful prognostic predictions by linking molecular characteristics such as the genetic aberrations of malignant tumors with medical images. The abnormal expression of serum microRNA-1246 (miR-1246) has been reported as a prognostic factor of esophageal squamous cell carcinoma (ESCC). To evaluate the power of the miR-1246 level predicted with radiogenomics techniques as a predictor of the prognosis of ESCC patients. The real miR-1246 expression (miR-1246(real)) was measured in 92 ESCC patients. Forty-five image features (IFs) were extracted from tumor regions on contrast-enhanced computed tomography. A prediction model for miR-1246(real) was constructed using linear regression with selected features identified in a correlation analysis of miR-1246(real) and each IF. A threshold to divide the patients into two groups was defined according to a receiver operating characteristic analysis for miR-1246(real). Survival analyses were performed between two groups. Six IFs were correlated with miR-1246(real) and were included in the prediction model. The survival curves of high and low groups of miR-1246(real) and miR-1246(pred) showed significant differences (p = 0.001 and 0.016). Both miR-1246(real) and miR-1246(pred) were independent predictors of overall survival (p = 0.030 and 0.035). miR-1246(pred) produced by radiogenomics had similar power to miR-1246(real) for predicting the prognosis of ESCC. Nature Publishing Group UK 2020-02-13 /pmc/articles/PMC7018689/ /pubmed/32054931 http://dx.doi.org/10.1038/s41598-020-59500-7 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hoshino, Isamu
Yokota, Hajime
Ishige, Fumitaka
Iwatate, Yosuke
Takeshita, Nobuyoshi
Nagase, Hiroki
Uno, Takashi
Matsubara, Hisahiro
Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title_full Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title_fullStr Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title_full_unstemmed Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title_short Radiogenomics predicts the expression of microRNA-1246 in the serum of esophageal cancer patients
title_sort radiogenomics predicts the expression of microrna-1246 in the serum of esophageal cancer patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018689/
https://www.ncbi.nlm.nih.gov/pubmed/32054931
http://dx.doi.org/10.1038/s41598-020-59500-7
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